RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 LPCAT4Q643R3 524 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 SPDL1Q96EA4 605 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 L3HYPDHQ96EM0 354 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 NSMCE3Q96MG7 304 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 NPAS2Q99743 824 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 CINPQ9BW66 212 aaPredicted RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 ZNF840PA6NDX5 716 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 H3BNX3 289 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 CRTAMO95727 393 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 HSPA1AP0DMV8 641 aaKnown RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 HSPA1BP0DMV9 641 aaKnown RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 RGRP47804 291 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 PKNOX1P55347 436 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 CEACAM7Q14002 265 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 UNC50Q53HI1 259 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 HECTD3Q5T447 861 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 GATA6Q92908 595 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 USP13Q92995 863 aaPredicted RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 RMDN1Q96DB5 314 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 KLHL4Q9C0H6 718 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 VCXQ9H320 206 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 GKN1Q9NS71 199 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 DLGAP2Q9P1A6 1054 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 INSIG1O15503 277 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 COCHO43405 550 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 CLDN11O75508 207 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 UPP2O95045 317 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 KLKB1P03952 638 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 PRSS56P0CW18 603 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 OGNP20774 298 aaKnown RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 MSX2P35548 267 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 RFTN1Q14699 578 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 PPP1R3AQ16821 1122 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 SLC8B1Q6J4K2 584 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 FAM126BQ8IXS8 530 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 PDZD8Q8NEN9 1154 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 AARSD1Q9BTE6 412 aaKnown RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 MRPL1Q9BYD6 325 aaKnown RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 VCX3BQ9H321 246 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 MRGBPQ9NV56 204 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 NLE1Q9NVX2 485 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 SPO11Q9Y5K1 396 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 ARSAP15289 507 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 XRCC1P18887 633 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 ME2P23368 584 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 DPP6P42658 865 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 SUOXP51687 545 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 STC1P52823 247 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 INHBCP55103 352 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 HERVK_113P63132 956 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 ZNF177Q13360 481 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 PDAP1Q13442 181 aaKnown RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 GSTA3Q16772 222 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 CLEC6AQ6EIG7 209 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 GK5Q6ZS86 529 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 PDSS2Q86YH6 399 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 RNF148Q8N7C7 305 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 EXT2Q93063 718 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 EXOC2Q96KP1 924 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 NR1H4Q96RI1 486 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 ERVK-6Q9BXR3 956 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 POPDC3Q9HBV1 291 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 POLR3BQ9NW08 1133 aaPredicted RBP13.84□□□□□ -0.19
NEK4-207ENST00000535191 SCOCQ9UIL1 159 aa13.84□□□□□ -0.19
NEK4-207ENST00000535191 CCDC189A1A4V9 331 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 ILVBLA1L0T0 632 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 PSMD12O00232 456 aaPredicted RBP13.83□□□□□ -0.2
NEK4-207ENST00000535191 TSPAN3O60637 253 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 CDH13P55290 713 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 NFKB2Q00653 900 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 MS4A2Q01362 244 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 STX5Q13190 355 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 FLOT2Q14254 428 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 USP41Q3LFD5 358 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 OR4K2Q8NGD2 314 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 OVCA2Q8WZ82 227 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 PPP2R3CQ969Q6 453 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 TMA16Q96EY4 203 aaKnown RBP13.83□□□□□ -0.2
NEK4-207ENST00000535191 CEP295NLQ96MC4 621 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 TRPC7Q9HCX4 862 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 SCUBE2Q9NQ36 999 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 MTRRQ9UBK8 725 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 BCAP29Q9UHQ4 241 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 ARIH1Q9Y4X5 557 aaPredicted RBP13.83□□□□□ -0.2
NEK4-207ENST00000535191 UBA6A0AVT1 1052 aaPredicted RBP13.83□□□□□ -0.2
NEK4-207ENST00000535191 STC2O76061 302 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 GNRH1P01148 92 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 RHOCP08134 193 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 LINGO3P0C6S8 592 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 ZNF37AP17032 561 aaPredicted RBP13.83□□□□□ -0.2
NEK4-207ENST00000535191 CORO1AP31146 461 aaKnown RBP13.83□□□□□ -0.2
NEK4-207ENST00000535191 FMO4P31512 558 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 SQLEQ14534 574 aa13.83□□□□□ -0.2
NEK4-207ENST00000535191 CYTH1Q15438 398 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms