RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 TRPM1Q7Z4N2 1603 aa5.22□□□□□ -1.57
SNHG1-201ENST00000535076 ADGRB3O60242 1522 aa5.22□□□□□ -1.57
SNHG1-201ENST00000535076 LRRC7Q96NW7 1537 aa5.22□□□□□ -1.57
SNHG1-201ENST00000535076 PCF11O94913 1555 aaKnown RBP5.21□□□□□ -1.57
SNHG1-201ENST00000535076 MLH3Q9UHC1 1453 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CHD2O14647 1828 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TMEM120BA0PK00 339 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PRAMEF27A3QJZ7 478 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 RGSL1A5PLK6 1076 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LINC00862A6NCI5 91 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LRRC14BA6NHZ5 514 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 ZNF729A6NN14 1252 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 NT5C1B-RDH14C9J2C7 533 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LOC110117498-PIK3R3F6TDL0 507 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 F6X3S4 739 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 DNALI1O14645 258 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TNPO2O14787 897 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 KCNQ2O43526 872 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CCNT2O60583 730 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TMEM127O75204 238 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TBX10O75333 385 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 NDUFS6O75380 124 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 SEC22BO75396 215 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CRCPO75575 148 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PIAS2O75928 621 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TMEM63AO94886 807 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 HAUS5O94927 633 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 OR6B1O95007 311 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 S100A8P05109 93 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 SLC3A2P08195 630 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CNPP09543 421 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 NR2F1P10589 423 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 HSPD1P10809 573 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CD8BP10966 210 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 RALAP11233 206 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CCDC130P13994 396 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CYP11B1P15538 503 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PHKG2P15735 406 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CKMT2P17540 419 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 HK1P19367 917 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TFE3P19532 575 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 ITIH2P19823 946 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 KCNA5P22460 613 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TGM1P22735 817 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 ADSSP30520 456 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 POLR2BP30876 1174 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 HMGCLP35914 325 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 ARL1P40616 181 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CAPZA2P47755 286 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LEPRP48357 1165 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TPMTP51580 245 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 STAT5BP51692 787 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PLK1P53350 603 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 EIF6P56537 245 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 HUNKP57058 714 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TAS2R60P59551 318 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 HTD2P86397 168 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 GLO1Q04760 184 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LMAN2Q12907 356 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 ZNF846Q147U1 533 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LRRC14Q15048 493 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 MLC1Q15049 377 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 SEC23AQ15436 765 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CCDC85BQ15834 202 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CA9Q16790 459 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 C21orf62-AS1Q17RA5 79 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TMEM44Q2T9K0 475 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 KHDC1Q4VXA5 237 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 WIPI1Q5MNZ9 446 aaPredicted RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PPM1LQ5SGD2 360 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 GPATCH4Q5T3I0 446 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 FAM102BQ5T8I3 360 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 DPY19L2P1Q6NXN4 242 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TTC27Q6P3X3 843 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 NFRKBQ6P4R8 1299 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 DEGS2Q6QHC5 323 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 KLHL24Q6TFL4 600 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 LMBR1LQ6UX01 489 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 MEX3BQ6ZN04 569 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 RNF207Q6ZRF8 634 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PTCHD4Q6ZW05 846 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 USP37Q86T82 979 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 MICU3Q86XE3 530 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 RFX6Q8HWS3 928 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 KRTAP1-3Q8IUG1 177 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PSTKQ8IV42 348 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CNGA4Q8IV77 575 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TP53INP2Q8IXH6 220 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CYP4Z2PQ8N1L4 340 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 PRR18Q8N4B5 295 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 SRBD1Q8N5C6 995 aaKnown RBP5.21□□□□□ -1.58
SNHG1-201ENST00000535076 SLC25A41Q8N5S1 370 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 FITM2Q8N6M3 262 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 CNTD1Q8N815 330 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 GSTCDQ8NEC7 633 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 ENGASEQ8NFI3 743 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 OR9A1PQ8NGU1 263 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 OR6Y1Q8NGX8 325 aa5.21□□□□□ -1.58
SNHG1-201ENST00000535076 TBC1D15Q8TC07 691 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms