RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 EFR3BQ9Y2G0 817 aa10.41□□□□□ -0.74
CSDE1-217ENST00000534699 AKR1B15C9JRZ8 316 aaPredicted RBP10.4□□□□□ -0.74
CSDE1-217ENST00000534699 KCNJ13O60928 360 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 SDC3O75056 442 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 CSO75390 466 aaKnown RBP10.4□□□□□ -0.74
CSDE1-217ENST00000534699 NEBLO76041 1014 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 DCDC1P59894 354 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 SKOR1P84550 965 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 ACOX1Q15067 660 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 PRRT3Q5FWE3 981 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 PAF1Q8N7H5 531 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 MYOCQ99972 504 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 CLPBQ9H078 707 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 GPR34Q9UPC5 381 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 NCOR2Q9Y618 2525 aa10.4□□□□□ -0.74
CSDE1-217ENST00000534699 SHROOM3Q8TF72 1996 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 A0A0J9YYE9 177 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 TEX51A0A1B0GUA7 166 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 BTNL10A8MVZ5 291 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 FFAR2O15552 330 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 TRBC1P01850 177 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 ABCG1P45844 678 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 STC1P52823 247 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 COPS2P61201 443 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 CNGA3Q16281 694 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 C14orf28Q4W4Y0 310 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 LEKR1Q6ZMV7 388 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 ZSWIM9Q86XI8 627 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 PCDH19Q8TAB3 1148 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 FUBP1Q96AE4 644 aaKnown RBP10.4□□□□□ -0.75
CSDE1-217ENST00000534699 MAK16Q9BXY0 300 aaKnown RBP10.4□□□□□ -0.75
CSDE1-217ENST00000534699 NOD2Q9HC29 1040 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 PKD2L2Q9NZM6 624 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 RAI2Q9Y5P3 530 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 AK5Q9Y6K8 562 aa10.4□□□□□ -0.75
CSDE1-217ENST00000534699 HACD1B0YJ81 288 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 MUSKO15146 869 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 CCNB1P14635 433 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 GM2AP17900 193 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 TGM2P21980 687 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 RBMS1P29558 406 aaKnown RBP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 TRAF2Q12933 501 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 SPIDRQ14159 915 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 PDZD3Q86UT5 571 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 SLC35F3Q8IY50 421 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 PGBD5Q8N414 524 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 ARL14Q8N4G2 192 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 CPLX3Q8WVH0 158 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 TADA1Q96BN2 335 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 HIC2Q96JB3 615 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 EXOC2Q96KP1 924 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 PRORYQ9H606 182 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 KLF15Q9UIH9 416 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 PRSS38A1L453 326 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 APOL1O14791 398 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 EPOP01588 193 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 ILF3Q12906 894 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 CERCAMQ5T4B2 595 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 ARHGAP36Q6ZRI8 547 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 HID1Q8IV36 788 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 CCHCR1Q8TD31 782 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 SH3KBP1Q96B97 665 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 SEMA3CQ99985 751 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 FERMT1Q9BQL6 677 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 TDRD1Q9BXT4 1180 aaKnown RBP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 TRABDQ9H4I3 376 aa10.39□□□□□ -0.75
CSDE1-217ENST00000534699 NHEJ1Q9H9Q4 299 aaPredicted RBP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 RBM22Q9NW64 420 aaKnown RBP eCLIP10.39□□□□□ -0.757e-6■■■■□ 24.6
CSDE1-217ENST00000534699 AKAP7Q9P0M2 348 aaPredicted RBP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 TDRD6O60522 2096 aaKnown RBP10.39□□□□□ -0.75
CSDE1-217ENST00000534699 KLHL33A6NCF5 533 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 OR5K4A6NMS3 321 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 PCCBP05166 539 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 FECHP22830 423 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
CSDE1-217ENST00000534699 RHDQ02161 417 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 XRCC4Q13426 336 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 SMTNL2Q2TAL5 461 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 TPRG1LQ5T0D9 272 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 C11orf63Q6NUN7 778 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 SLC35G2Q8TBE7 412 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 ARRDC2Q8TBH0 407 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.38□□□□□ -0.75
CSDE1-217ENST00000534699 COX14Q96I36 57 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 LRRN3Q9H3W5 708 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 UCK1Q9HA47 277 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 MAGEE1Q9HCI5 957 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 ETNK2Q9NVF9 386 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 CDRT15L2A8MXV6 281 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 MFSD11O43934 449 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 SSR1P43307 286 aaKnown RBP10.38□□□□□ -0.75
CSDE1-217ENST00000534699 NUMBP49757 651 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 CDK3Q00526 305 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 HLTFQ14527 1009 aaKnown RBP eCLIP10.38□□□□□ -0.75
CSDE1-217ENST00000534699 PPP2R5EQ16537 467 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 ODF2Q5BJF6 829 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 RCOR2Q8IZ40 523 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 PQLC3Q8N755 202 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 MDM1Q8TC05 714 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms