RNA–Protein interactions for RNA: ENST00000534011.5

FOXRED1-217, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 1,955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-217ENST00000534011 RNF135Q8IUD6 432 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 CILP2Q8IUL8 1156 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 ADGRG5Q8IZF4 528 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 PNPT1Q8TCS8 783 aaKnown RBP13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 RNF34Q969K3 372 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 PHF21BQ96EK2 531 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 VPS50Q96JG6 964 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 SLC39A3Q9BRY0 314 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 CXorf21Q9HAI6 301 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 RBM22Q9NW64 420 aaKnown RBP eCLIP13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 FNIP2Q9P278 1114 aa13.91□□□□□ -0.18
FOXRED1-217ENST00000534011 MYBPHLA2RUH7 354 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 FXYD1O00168 92 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 PTGESO14684 152 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 ANGPT2O15123 496 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 PMPCBO75439 489 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SUPT7LO94864 414 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 HNRNPCP07910 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SMPD1P17405 629 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 MRPL19P49406 292 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 ENTPD1P49961 510 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 PLK1P53350 603 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 ZNF829Q3KNS6 432 aaPredicted RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 CLEC6AQ6EIG7 209 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 RPS27LQ71UM5 84 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 PAPD5Q8NDF8 572 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 OR6J1Q8NGC5 347 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 FAM110BQ8TC76 370 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 DQX1Q8TE96 717 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 FATE1Q969F0 183 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 BORCS5Q969J3 196 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 TRIM54Q9BYV2 358 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SLC39A8Q9C0K1 460 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SLC25A51Q9H1U9 297 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 MFSD1Q9H3U5 465 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 FBRSL1Q9HCM7 1045 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SDR39U1Q9NRG7 319 aaPredicted RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 SLC38A7Q9NVC3 462 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 OSER1Q9NX31 292 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 GMPR2Q9P2T1 348 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 AURKCQ9UQB9 309 aa13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 DICER1Q9UPY3 1922 aaKnown RBP13.9□□□□□ -0.18
FOXRED1-217ENST00000534011 NR5A2O00482 541 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 ACOX3O15254 700 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 VPS4BO75351 444 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SMIM10L2AP0DMW4 78 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SMIM10L2BP0DMW5 78 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 UMPSP11172 480 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 GFAPP14136 432 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 RPL10P27635 214 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CHRNA4P43681 627 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 WNT3AP56704 352 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CTBSQ01459 385 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 GRSF1Q12849 480 aaKnown RBP eCLIP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 ZNF789Q5FWF6 425 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 ELMSAN1Q6PJG2 1045 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 PTRH1Q86Y79 214 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SULF1Q8IWU6 871 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 ANKRD49Q8WVL7 239 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 TMEM40Q8WWA1 233 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 C3orf30Q96M34 536 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 TBC1D23Q9NUY8 699 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 DNAJC15Q9Y5T4 150 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 RNF103-CHMP3A0A140T963 221 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 TYW5A2RUC4 315 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 H3BMQ9 156 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CLOCKO15516 846 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 ZNF12P17014 697 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CAPN3P20807 821 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SLC6A2P23975 617 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 PCSK1P29120 753 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CAPGP40121 348 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 MAGEA8P43361 318 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SERPINH1P50454 418 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 RABGGTBP53611 331 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 GRIK2Q13002 908 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SPIDRQ14159 915 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 C16orf72Q14CZ0 275 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 PITRM1Q5JRX3 1037 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SPPL2CQ8IUH8 684 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 PHYKPLQ8IUZ5 450 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 GPRC5AQ8NFJ5 357 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SNRNP27Q8WVK2 155 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 LRRC58Q96CX6 371 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 COG8Q96MW5 612 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 ALG9Q9H6U8 611 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 PALMDQ9NP74 551 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 CMTM6Q9NX76 183 aa13.89□□□□□ -0.19
FOXRED1-217ENST00000534011 SH3GLB1Q9Y371 365 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms