RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 NAF1Q96HR8 494 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 COQ10AQ96MF6 247 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 GFM1Q96RP9 751 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 STRADBQ9C0K7 418 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 CYP4F12Q9HCS2 524 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 ASCL3Q9NQ33 180 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 PHPT1Q9NRX4 125 aaPredicted RBP12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 LCMT1Q9UIC8 334 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 MOSPD1Q9UJG1 213 aa12.43□□□□□ -0.42
CAPRIN1-213ENST00000533562 HELZ2Q9BYK8 2649 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCDC187A0A096LP49 1063 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 TEX51A0A1B0GUA7 166 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 TK2O00142 265 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 PSMD11O00231 422 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 HEXIM1O94992 359 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 PGLSO95336 258 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 MYCLP1P12525 358 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 PNLIPP16233 465 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 GLB1P16278 677 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 GM2AP17900 193 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 MAXP61244 160 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 CXADRP78310 365 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 ITKQ08881 620 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 EIF3IQ13347 325 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 CNGA3Q16281 694 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 DENND2CQ68D51 928 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 TIGD7Q6NT04 549 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 FOXR1Q6PIV2 292 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 USP45Q70EL2 814 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 CBARPQ8N350 705 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 TEX26Q8N6G2 289 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 LSM14AQ8ND56 463 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 GPR156Q8NFN8 814 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 ZNF564Q8TBZ8 553 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 FAM71BQ8TC56 605 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 LGR4Q9BXB1 951 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 TMEM168Q9H0V1 697 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 DPEP2Q9H4A9 486 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 FGF22Q9HCT0 170 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 NT5MQ9NPB1 228 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 MRPL40Q9NQ50 206 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 CTTNBP2NLQ9P2B4 639 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 UVRAGQ9P2Y5 699 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 APPL1Q9UKG1 709 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 AHCTF1Q8WYP5 2266 aa12.42□□□□□ -0.42
CAPRIN1-213ENST00000533562 KIF26BQ2KJY2 2108 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 CFAP46Q8IYW2 2715 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 PRSS38A1L453 326 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 MATN3O15232 486 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 KLK10O43240 276 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 TNFSF15O95150 251 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 GYPCP04921 128 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 RPLP0P05388 317 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 KRT7P08729 469 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 H2AFZP0C0S5 128 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 CASP14P31944 242 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 ETV3P41162 512 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 GARSP41250 739 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 TMPRSS3P57727 454 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 CCL7P80098 99 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 TRAF2Q12933 501 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 PEX6Q13608 980 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 PDK2Q15119 407 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 IFI16Q16666 785 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 ANKRD20A8PQ5CZ79 823 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 NYAP1Q6ZVC0 841 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 H2AFVQ71UI9 128 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 KIAA1524Q8TCG1 905 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 CTNNBL1Q8WYA6 563 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 DTD2Q96FN9 168 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 LIN37Q96GY3 246 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 PRR11Q96HE9 360 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 MCCC1Q96RQ3 725 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 SEMA3CQ99985 751 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 TEX101Q9BY14 249 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 POLR1EQ9GZS1 481 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 LRRN3Q9H3W5 708 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 CARS2Q9HA77 564 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 AMACRQ9UHK6 382 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 PPIL1Q9Y3C6 166 aa12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 ARHGEF17Q96PE2 2063 aaPredicted RBP12.41□□□□□ -0.42
CAPRIN1-213ENST00000533562 PIEZO2Q9H5I5 2752 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 A0A1W2PNU3 283 aaPredicted RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GOLGA6CA6NDK9 693 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GOLGA6BA6NDN3 693 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 NPIPB15A6NHN6 443 aaPredicted RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 D6RAR5 112 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ATXN7O15265 892 aaPredicted RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ZW10O43264 779 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 NUDT21O43809 227 aaKnown RBP12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 PROSCO94903 275 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 ITGA2BP08514 1039 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 CD48P09326 243 aa12.4□□□□□ -0.42
CAPRIN1-213ENST00000533562 GOLGA6DP0CG33 693 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms