RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PLPP6Q8IY26 295 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 SLC35F3Q8IY50 421 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 RBFAQ8N0V3 343 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 OR2AP1Q8NGE2 309 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 WDR36Q8NI36 951 aaKnown RBP8.77□□□□□ -1.01
COPB1-210ENST00000533533 PCDH19Q8TAB3 1148 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 WDR48Q8TAF3 677 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 CASKIN2Q8WXE0 1202 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 GLMNQ92990 594 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 NAT6Q93015 286 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 ISG20Q96AZ6 181 aaKnown RBP8.77□□□□□ -1.01
COPB1-210ENST00000533533 CENPTQ96BT3 561 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 TBATAQ96M53 351 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 GDAP1L1Q96MZ0 367 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 ZNF830Q96NB3 372 aaPredicted RBP8.77□□□□□ -1.01
COPB1-210ENST00000533533 ZNF670Q9BS34 389 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 LACRTQ9GZZ8 138 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 TCEAL2Q9H3H9 227 aaPredicted RBP8.77□□□□□ -1.01
COPB1-210ENST00000533533 CLMPQ9H6B4 373 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 SPASTQ9UBP0 616 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 TRIM10Q9UDY6 481 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 APOBEC3BQ9UH17 382 aaKnown RBP8.77□□□□□ -1.01
COPB1-210ENST00000533533 GGT7Q9UJ14 662 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.77□□□□□ -1.01
COPB1-210ENST00000533533 HEY1Q9Y5J3 304 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 NOTCH2Q04721 2471 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 LRP4O75096 1905 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 CCDC187A0A096LP49 1063 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 A0A0U1RQJ8 604 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 CXorf51AA0A1B0GTR3 108 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 PYCARD-AS1I3L0S3 204 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 APOL1O14791 398 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 CASC3O15234 703 aaKnown RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 YY2O15391 372 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ARHGAP6O43182 974 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 PSTPIP1O43586 416 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 MFSD11O43934 449 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 TNFSF15O95150 251 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 POP4O95707 220 aaKnown RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 GSRP00390 522 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 UGT2B4P06133 528 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ANXA6P08133 673 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ITGA2BP08514 1039 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 IL4RP24394 825 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ABL2P42684 1182 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 THOP1P52888 689 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 HADHBP55084 474 aaKnown RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 KCNC4Q03721 635 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 IL10RBQ08334 325 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ITKQ08881 620 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 C1orf61Q13536 156 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 SPIDRQ14159 915 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 PTK2BQ14289 1009 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ZNF235Q14590 738 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 CYTH1Q15438 398 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 MYLK3Q32MK0 819 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 INO80DQ53TQ3 878 aaPredicted RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 CFAP58Q5T655 872 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 CCDC181Q5TID7 509 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 NCBP2-AS2Q69YL0 99 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 C11orf63Q6NUN7 778 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 MFSD7Q6UXD7 560 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 LRRC8AQ8IWT6 810 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 PHACTR4Q8IZ21 702 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 BBS5Q8N3I7 341 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.76□□□□□ -1.01
COPB1-210ENST00000533533 CCNYQ8ND76 341 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 KIAA1524Q8TCG1 905 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 LRRN4Q8WUT4 740 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 VOPP1Q96AW1 172 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 RNF157Q96PX1 679 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 CCNL2Q96S94 520 aaPredicted RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 CCDC3Q9BQI4 270 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 LRRC61Q9BV99 259 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 SLC13A1Q9BZW2 595 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 PNMA8BQ9ULN7 279 aaPredicted RBP8.76□□□□□ -1.01
COPB1-210ENST00000533533 PADI4Q9UM07 663 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 GUCA1BQ9UMX6 200 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 ITM2BQ9Y287 266 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 TTLL3Q9Y4R7 772 aa8.76□□□□□ -1.01
COPB1-210ENST00000533533 USP9YO00507 2555 aaPredicted RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 CYSRT1A8MQ03 144 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 BTNL10A8MVZ5 291 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 NTN3O00634 580 aaPredicted RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 TOR1BO14657 336 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 AREL1O15033 823 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 INSIG1O15503 277 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 PJA2O43164 708 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 KRT86O43790 486 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 SLC28A2O43868 658 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 ZRANB2O95218 330 aaKnown RBP eCLIP8.75□□□□□ -1.011e-7■■□□□ 13.1
COPB1-210ENST00000533533 WISP1O95388 367 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 KRT10P13645 584 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 TSHRP16473 764 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 XPAP23025 273 aaPredicted RBP8.75□□□□□ -1.01
COPB1-210ENST00000533533 IGFALSP35858 605 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 MARCKSL1P49006 195 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 SCNN1BP51168 640 aa8.75□□□□□ -1.01
COPB1-210ENST00000533533 YPEL5P62699 121 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms