RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ITPKBP27987 946 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 EPHB1P54762 984 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 TAS2R40P59535 323 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 SPIDRQ14159 915 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 MESDQ14696 234 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 NYAP1Q6ZVC0 841 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 CPNE8Q86YQ8 564 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.46■□□□□ 0.07
CPSF1-211ENST00000533492 FAM46DQ8NEK8 389 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 OR6C4Q8NGE1 309 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 OR1E3Q8WZA6 343 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 CCDC42Q96M95 316 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 ZNF578Q96N58 590 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-211ENST00000533492 DNAJC7Q99615 494 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 LGR4Q9BXB1 951 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 CYP4F12Q9HCS2 524 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 FGF22Q9HCT0 170 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 MRPL40Q9NQ50 206 aaKnown RBP15.46■□□□□ 0.07
CPSF1-211ENST00000533492 PHPT1Q9NRX4 125 aaPredicted RBP15.46■□□□□ 0.07
CPSF1-211ENST00000533492 RBM22Q9NW64 420 aaKnown RBP eCLIP15.46■□□□□ 0.07
CPSF1-211ENST00000533492 GOLGA6AQ9NYA3 693 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 TTLL3Q9Y4R7 772 aa15.46■□□□□ 0.07
CPSF1-211ENST00000533492 NBEAQ8NFP9 2946 aa15.46■□□□□ 0.06
CPSF1-211ENST00000533492 NPIPB15A6NHN6 443 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-211ENST00000533492 PSMD11O00231 422 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 RBMS1P29558 406 aaKnown RBP15.45■□□□□ 0.06
CPSF1-211ENST00000533492 MAN1A1P33908 653 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 ETV3P41162 512 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 CCDC173Q0VFZ6 552 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 ASTE1Q2TB18 679 aaPredicted RBP15.45■□□□□ 0.06
CPSF1-211ENST00000533492 C3orf38Q5JPI3 329 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 HSD11B1LQ7Z5J1 315 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 KYQ8NBH2 561 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 CCNYQ8ND76 341 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 PIH1D2Q8WWB5 315 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 ATXN7L3BQ96GX2 97 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 TSGA13Q96PP4 275 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 TMEM168Q9H0V1 697 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 AMACRQ9UHK6 382 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 CELSR3Q9NYQ7 3312 aa15.45■□□□□ 0.06
CPSF1-211ENST00000533492 ITPR1Q14643 2758 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 PDHA1P08559 390 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 MYCLP1P12525 358 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 CCNB1P14635 433 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 CA4P22748 312 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 LHCGRP22888 699 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 KDELR1P24390 212 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 PCBP4P57723 403 aaKnown RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 ODF2Q5BJF6 829 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 KCTD16Q68DU8 428 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 RAET1GQ6H3X3 334 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 Q6ZVL8 140 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 TSPAN33Q86UF1 283 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 HEATR4Q86WZ0 1026 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 VSTM4Q8IW00 320 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 PELI3Q8N2H9 469 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 RNF214Q8ND24 703 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 ZNF248Q8NDW4 579 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 SLC35G2Q8TBE7 412 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 MAML1Q92585 1016 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 CCDC74AQ96AQ1 378 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 DTD2Q96FN9 168 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 CRELD1Q96HD1 420 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 ZNF830Q96NB3 372 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 MCCC1Q96RQ3 725 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 LGMNQ99538 433 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 CHP1Q99653 195 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 ANP32EQ9BTT0 268 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 MAK16Q9BXY0 300 aaKnown RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 DPEP2Q9H4A9 486 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 SUDS3Q9H7L9 328 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 NHEJ1Q9H9Q4 299 aaPredicted RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 CARS2Q9HA77 564 aaKnown RBP15.44■□□□□ 0.06
CPSF1-211ENST00000533492 ABHD10Q9NUJ1 306 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 SATB2Q9UPW6 733 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 PPIL1Q9Y3C6 166 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 ENTPD2Q9Y5L3 495 aa15.44■□□□□ 0.06
CPSF1-211ENST00000533492 LRP4O75096 1905 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 PRSS38A1L453 326 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 DXOO77932 396 aaKnown RBP15.43■□□□□ 0.06
CPSF1-211ENST00000533492 ARHGAP25P42331 645 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 GPR1P46091 355 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 ERVPABLB-1P60509 514 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 DSC2Q02487 901 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 GBE1Q04446 702 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 PTPRRQ15256 657 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 FOXR1Q6PIV2 292 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 CBARPQ8N350 705 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-211ENST00000533492 PQLC3Q8N755 202 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 GPR156Q8NFN8 814 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.43■□□□□ 0.06
CPSF1-211ENST00000533492 LRRN4Q8WUT4 740 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 RAPGEF5Q92565 580 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 FATE1Q969F0 183 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 FAF2Q96CS3 445 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 NAF1Q96HR8 494 aaKnown RBP15.43■□□□□ 0.06
CPSF1-211ENST00000533492 RNF157Q96PX1 679 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 GFM1Q96RP9 751 aaKnown RBP15.43■□□□□ 0.06
CPSF1-211ENST00000533492 TEX101Q9BY14 249 aa15.43■□□□□ 0.06
CPSF1-211ENST00000533492 THSD1Q9NS62 852 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms