RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 PELI3Q8N2H9 469 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 ARL10Q8N8L6 244 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 ACRBPQ8NEB7 543 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 ATL2Q8NHH9 583 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 PCDH19Q8TAB3 1148 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 WDR48Q8TAF3 677 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 WBP1Q96G27 269 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 PDXPQ96GD0 296 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 COQ10AQ96MF6 247 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 RBM15Q96T37 977 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLCF1-202ENST00000533438 CCDC3Q9BQI4 270 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 LUC7LQ9NQ29 371 aaKnown RBP11.34□□□□□ -0.59
CLCF1-202ENST00000533438 ASCL3Q9NQ33 180 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 KCND1Q9NSA2 647 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 RCOR3Q9P2K3 495 aaPredicted RBP11.34□□□□□ -0.59
CLCF1-202ENST00000533438 B4GALT6Q9UBX8 382 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 INTUQ9ULD6 942 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 PCDHGC4Q9Y5F7 938 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 MAST4O15021 2626 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 SCN8AQ9UQD0 1980 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 PTPRQQ9UMZ3 2332 aa11.34□□□□□ -0.59
CLCF1-202ENST00000533438 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 ARHGEF17Q96PE2 2063 aaPredicted RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 TEX51A0A1B0GUA7 166 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 CAPN8A6NHC0 703 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 A8MX80 341 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 TNFRSF10CO14798 259 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 TNFP01375 233 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 CCDC175P0C221 793 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 ARSEP51690 589 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 VAV2P52735 878 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 CDH6P55285 790 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PCBP4P57723 403 aaKnown RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 MAXP61244 160 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 TLE3Q04726 772 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 TRAF2Q12933 501 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 CNGA3Q16281 694 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 RALGPS1Q5JS13 557 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PNCKQ6P2M8 343 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PCSK4Q6UW60 755 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 RBM44Q6ZP01 1051 aaKnown RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 RD3Q7Z3Z2 195 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 SPACA3Q8IXA5 215 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 CBARPQ8N350 705 aaPredicted RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 ATPAF2Q8N5M1 289 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 TEX26Q8N6G2 289 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 KYQ8NBH2 561 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF248Q8NDW4 579 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 OR56A4Q8NGH8 313 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 KIAA1524Q8TCG1 905 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 SCG3Q8WXD2 468 aaKnown RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 OR1E3Q8WZA6 343 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 ATXN7L3BQ96GX2 97 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PRR11Q96HE9 360 aaPredicted RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 DESI2Q9BSY9 194 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 LGR4Q9BXB1 951 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 NOD2Q9HC29 1040 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 FGF22Q9HCT0 170 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.33□□□□□ -0.6
CLCF1-202ENST00000533438 SIRPGQ9P1W8 387 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 RABGEF1Q9UJ41 708 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PHTF1Q9UMS5 762 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 DOLKQ9UPQ8 538 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PPP2R2CQ9Y2T4 447 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PPIL1Q9Y3C6 166 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 PCDHA13Q9Y5I0 950 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 RAI2Q9Y5P3 530 aa11.33□□□□□ -0.6
CLCF1-202ENST00000533438 MYO1FO00160 1098 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 CACNB4O00305 520 aaPredicted RBP11.32□□□□□ -0.6
CLCF1-202ENST00000533438 HEXIM1O94992 359 aaKnown RBP11.32□□□□□ -0.6
CLCF1-202ENST00000533438 CPP00450 1065 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 CD48P09326 243 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 PLA2G2AP14555 144 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 LHCGRP22888 699 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 KELP23276 732 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 VIPR1P32241 457 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 MAGEA1P43355 309 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 MMP13P45452 471 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 SKOR1P84550 965 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 MMRN1Q13201 1228 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 ACOX1Q15067 660 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 PAFAH1B3Q15102 231 aaKnown RBP11.32□□□□□ -0.6
CLCF1-202ENST00000533438 TCEA2Q15560 299 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 ATP13A4Q4VNC1 1196 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 C3orf38Q5JPI3 329 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 MARC1Q5VT66 337 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 NCBP2-AS2Q69YL0 99 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 OGFOD3Q6PK18 319 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 H2AFVQ71UI9 128 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 BBS5Q8N3I7 341 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 TXLNBQ8N3L3 684 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF843Q8N446 348 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 GPR156Q8NFN8 814 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 OR6C4Q8NGE1 309 aa11.32□□□□□ -0.6
CLCF1-202ENST00000533438 ZNF564Q8TBZ8 553 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms