RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 CDKN3Q16667 212 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 CDKL3Q8IVW4 592 aaPredicted RBP20.46■□□□□ 0.87
CCS-208ENST00000533244 RAVER1Q8IY67 606 aaKnown RBP20.46■□□□□ 0.87
CCS-208ENST00000533244 PELI3Q8N2H9 469 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 SLC25A45Q8N413 288 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 NUS1Q96E22 293 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 FCRL5Q96RD9 977 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 CDC6Q99741 560 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 APOOQ9BUR5 198 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 ADGRE3Q9BY15 652 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 CAAP1Q9H8G2 361 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 C10orf88Q9H8K7 445 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 KLHL8Q9P2G9 620 aaPredicted RBP20.46■□□□□ 0.87
CCS-208ENST00000533244 KLF15Q9UIH9 416 aa20.46■□□□□ 0.87
CCS-208ENST00000533244 PNMA8BQ9ULN7 279 aaPredicted RBP20.46■□□□□ 0.87
CCS-208ENST00000533244 A0A0U1RQS6 177 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 HOXC4P09017 264 aaPredicted RBP20.45■□□□□ 0.86
CCS-208ENST00000533244 ETV3P41162 512 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 STC1P52823 247 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 HNRNPKP61978 463 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCS-208ENST00000533244 SIM1P81133 766 aaPredicted RBP20.45■□□□□ 0.86
CCS-208ENST00000533244 PTSQ03393 145 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 NFATC4Q14934 902 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 KDELC1Q6UW63 502 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 TTC13Q8NBP0 860 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 ALS2CR12Q96Q35 445 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 FAM118BQ9BPY3 351 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 DNAJC28Q9NX36 388 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 LRP4O75096 1905 aa20.45■□□□□ 0.86
CCS-208ENST00000533244 GOLGA6L9A6NEM1 432 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 SDC3O75056 442 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 ZNF189O75820 626 aaPredicted RBP20.44■□□□□ 0.86
CCS-208ENST00000533244 C1SP09871 688 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 GIMD1P0DJR0 217 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 TEAD1P28347 426 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 KIAA1024LP59773 190 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 CDK18Q07002 472 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 DPTQ07507 201 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 GALNT3Q14435 633 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 ZNF542PQ5EBM4 170 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 PNCKQ6P2M8 343 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 Q6ZVL8 140 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 PID1Q7Z2X4 250 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 TRIM58Q8NG06 486 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 OXNAD1Q96HP4 312 aaPredicted RBP20.44■□□□□ 0.86
CCS-208ENST00000533244 TBATAQ96M53 351 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 MLPHQ9BV36 600 aaPredicted RBP20.44■□□□□ 0.86
CCS-208ENST00000533244 CARD9Q9H257 536 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 KCNF1Q9H3M0 494 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 USP29Q9HBJ7 922 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 UCKL1Q9NWZ5 548 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 FAM153AQ9UHL3 310 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 OR1A2Q9Y585 309 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 TCRBV7S2A1N4TA0A589 114 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 K7ESM1 405 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 PMLP29590 882 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 DENND2CQ68D51 928 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 ZNF765Q7L2R6 523 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 NLRP8Q86W28 1048 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 SLC35B2Q8TB61 432 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 FUBP1Q96AE4 644 aaKnown RBP20.44■□□□□ 0.86
CCS-208ENST00000533244 GORASP1Q9BQQ3 440 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 GBA3Q9H227 469 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 TOR4AQ9NXH8 423 aa20.44■□□□□ 0.86
CCS-208ENST00000533244 R3HDM2Q9Y2K5 976 aaKnown RBP20.44■□□□□ 0.86
CCS-208ENST00000533244 TDRD6O60522 2096 aaKnown RBP20.43■□□□□ 0.86
CCS-208ENST00000533244 LOC285095A0A1B0GVY8 99 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 GOLGA8CPA6NN73 597 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 H3BM21 787 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 PMPCBO75439 489 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 DKK1O94907 266 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 CLDN7O95471 211 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 NDST3O95803 873 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 TSHRP16473 764 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 RPS6KA1Q15418 735 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 PCSK7Q16549 785 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 SEL1L2Q5TEA6 688 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 DARS2Q6PI48 645 aaKnown RBP20.43■□□□□ 0.86
CCS-208ENST00000533244 RFLNAQ6ZTI6 216 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 PHACTR4Q8IZ21 702 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 EID2Q8N6I1 236 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 ZNF548Q8NEK5 533 aaPredicted RBP20.43■□□□□ 0.86
CCS-208ENST00000533244 MRGPRX2Q96LB1 330 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 FERMT1Q9BQL6 677 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 UBP1Q9NZI7 540 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 WASF3Q9UPY6 502 aa20.43■□□□□ 0.86
CCS-208ENST00000533244 KCNN4O15554 427 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 TNFSF14O43557 240 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 SOD1P00441 154 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 EPOP01588 193 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 JUNDP17535 347 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 HTR1BP28222 390 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 WNT3AP56704 352 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 ANKRD20A2Q5SQ80 823 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 ANKRD20A1Q5TYW2 823 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 ANKRD20A3Q5VUR7 823 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 NRSN1Q8IZ57 195 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 RBFAQ8N0V3 343 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 OR4C6Q8NH72 309 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 BTN2A2Q8WVV5 523 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms