RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SLC13A5Q86YT5 568 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCDC50Q8IVM0 306 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 CTAGE4Q8IX94 777 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 ARL10Q8N8L6 244 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 OR6C4Q8NGE1 309 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 TEKT4Q8WW24 435 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 SCG3Q8WXD2 468 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 USP7Q93009 1102 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 FEM1CQ96JP0 617 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 MAGEB5Q9BZ81 275 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 SLC13A1Q9BZW2 595 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 PIGVQ9NUD9 493 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 GPATCH2LQ9NWQ4 482 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 FOXJ2Q9P0K8 574 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 APOBEC3BQ9UH17 382 aaKnown RBP11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 RP1P56715 2156 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 BSNQ9UPA5 3926 aa11.41□□□□□ -0.58
TRAPPC4-213ENST00000533149 LRRD1A4D1F6 860 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 C3orf70A6NLC5 250 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 STMND1H3BQB6 276 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 YY2O15391 372 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 BNIP3LO60238 219 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 GCATO75600 419 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 PAK4O96013 591 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 IGLV3-25P01717 112 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 PRNPP04156 253 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ITIH1P19827 911 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 CHRNA3P32297 505 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ADRA1BP35368 520 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ARSEP51690 589 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 COPS2P61201 443 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCL7P80098 99 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 EIF2B5Q13144 721 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 EIF4EBP2Q13542 120 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 CA9Q16790 459 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZC3H12AQ5D1E8 599 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 TTC39BQ5VTQ0 682 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ERN2Q76MJ5 926 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZNF572Q7Z3I7 529 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCDC185Q8N715 623 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 SPATA4Q8NEY3 305 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 GPBAR1Q8TDU6 330 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 CCDC74AQ96AQ1 378 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 PPP1R16AQ96I34 528 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 LENG8Q96PV6 779 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 NAP1L3Q99457 506 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 EPAS1Q99814 870 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 SNRNP25Q9BV90 132 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 HEMGNQ9BXL5 484 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 HDAC8Q9BY41 377 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 OSBPL8Q9BZF1 889 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 LRRN3Q9H3W5 708 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 WDCPQ9H6R7 721 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 ZNF71Q9NQZ8 489 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 GULP1Q9UBP9 304 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 FZD10Q9ULW2 581 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 DOLKQ9UPQ8 538 aa11.4□□□□□ -0.58
TRAPPC4-213ENST00000533149 LRRK1Q38SD2 2015 aa11.4□□□□□ -0.59
TRAPPC4-213ENST00000533149 ICE1Q9Y2F5 2266 aa11.4□□□□□ -0.59
TRAPPC4-213ENST00000533149 A0A1W2PQM1 296 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 TCRBV7S2A1N4TA0A589 114 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 F5H5T6 163 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 KRIT1O00522 736 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 SPINT1O43278 529 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 MOCS2O96007 188 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 APOEP02649 317 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 CTSLP07711 333 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 CD48P09326 243 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 TACR2P21452 398 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 ELAVL4P26378 380 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 L1CAMP32004 1257 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 CDKN2BP42772 138 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 NUMBP49757 651 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 THOP1P52888 689 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 MAPK10P53779 464 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 CDH6P55285 790 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 ZFP36L1Q07352 338 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 SGCGQ13326 291 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 C1orf61Q13536 156 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 KRT81Q14533 505 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 PDK2Q15119 407 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 TAZQ16635 292 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 RAP1GAP2Q684P5 730 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 LVRNQ6Q4G3 990 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 CHSY1Q86X52 802 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 PSTKQ8IV42 348 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 MAP7D3Q8IWC1 876 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 PHACTR4Q8IZ21 702 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 RBFAQ8N0V3 343 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 SDR16C5Q8N3Y7 309 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 SH2D3CQ8N5H7 860 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 SSC4DQ8WTU2 575 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 SLC39A13Q96H72 371 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 BTN2A3PQ96KV6 586 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 FEM1AQ9BSK4 669 aa11.39□□□□□ -0.59
TRAPPC4-213ENST00000533149 LRRC61Q9BV99 259 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms