RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 BLACEA4D250 179 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 ZNF891A8MT65 544 aaPredicted RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 F8VZ95 297 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 DFFAO00273 331 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 HGSO14964 777 aaPredicted RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 CCP110O43303 1012 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 DUX1O43812 170 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 PRAMEF11O60813 436 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 CASRP41180 1078 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 NSFP46459 744 aaKnown RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 CTBSQ01459 385 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 FMO1Q01740 532 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 HIST2H2BCQ6DN03 193 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 GPBAR1Q8TDU6 330 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 ABHD17AQ96GS6 310 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 TUBGCP5Q96RT8 1024 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 ASPSCR1Q9BZE9 553 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 B3GNT4Q9C0J1 378 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 CDH19Q9H159 772 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 NLRC4Q9NPP4 1024 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 PHPT1Q9NRX4 125 aaPredicted RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 B4GALT6Q9UBX8 382 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 ANAPC2Q9UJX6 822 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 NOCTQ9UK39 431 aaKnown RBP13.04□□□□□ -0.32
COPB1-209ENST00000533096 FZD10Q9ULW2 581 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 SUFUQ9UMX1 484 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 TMEM98Q9Y2Y6 226 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
COPB1-209ENST00000533096 RP1P56715 2156 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 CFAP69A5D8W1 941 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 ARHGAP42A6NI28 874 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 SIGLEC16A6NMB1 481 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 CEACAM5P06731 702 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 GM2AP17900 193 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 ADCY8P40145 1251 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 KLK7P49862 253 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 TPI1P60174 286 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 POLR2FP61218 127 aaKnown RBP13.03□□□□□ -0.32
COPB1-209ENST00000533096 PTPRRQ15256 657 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 SMYD5Q6GMV2 418 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 MARK2Q7KZI7 788 aaKnown RBP13.03□□□□□ -0.32
COPB1-209ENST00000533096 DPPA4Q7L190 304 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 HEATR4Q86WZ0 1026 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 NAGSQ8N159 534 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 OR4D9Q8NGE8 314 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 KIAA1143Q96AT1 154 aaPredicted RBP13.03□□□□□ -0.32
COPB1-209ENST00000533096 NUS1Q96E22 293 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 CATSPER2Q96P56 530 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 VPS16Q9H269 839 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 SP110Q9HB58 689 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 PDFQ9HBH1 243 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 SAMSN1Q9NSI8 373 aaKnown RBP13.03□□□□□ -0.32
COPB1-209ENST00000533096 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 PCDHGC4Q9Y5F7 938 aa13.03□□□□□ -0.32
COPB1-209ENST00000533096 NAV2Q8IVL1 2488 aa13.02□□□□□ -0.32
COPB1-209ENST00000533096 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.32
COPB1-209ENST00000533096 IGHV1OR21-1A0A087WYE8 117 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 LOC101059948A0A1B0GTJ6 334 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 WASH4PA8MWX3 477 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 MTSS1O43312 755 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 MYCLP1P12525 358 aaPredicted RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 ETV3P41162 512 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 ACTR1BP42025 376 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 MAPK9P45984 424 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 GPR3P46089 330 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 CSNK1DP48730 415 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 ACTR1AP61163 376 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 RPL7AP62424 266 aaKnown RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 PTP4A2Q12974 167 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 TRA2AQ13595 282 aaKnown RBP eCLIP13.02□□□□□ -0.33
COPB1-209ENST00000533096 ATP1A1-AS1Q5TC04 95 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 TMEM71Q6P5X7 295 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 ZNF438Q7Z4V0 828 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 C17orf82Q86X59 251 aaPredicted RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 NCSTNQ92542 709 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 PCMTD1Q96MG8 357 aaPredicted RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 SLC38A3Q99624 504 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 DDA1Q9BW61 102 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 DHX35Q9H5Z1 703 aaKnown RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 FAM207AQ9NSI2 230 aaPredicted RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.33
COPB1-209ENST00000533096 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 ST14Q9Y5Y6 855 aa13.02□□□□□ -0.33
COPB1-209ENST00000533096 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 EEF2KO00418 725 aaKnown RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 FGF10O15520 208 aaPredicted RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 UNGP13051 313 aaPredicted RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 NR1D1P20393 614 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 MAP4P27816 1152 aaKnown RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms