RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 PADI4Q9UM07 663 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 LTBP3Q9NS15 1303 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ORC5O43913 435 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FOXD2O60548 495 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CRTAPO75718 401 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SCGNO76038 276 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CPSF4O95639 269 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 COMTP21964 271 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 AMPD1P23109 780 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 DSG2Q14126 1118 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CACHD1Q5VU97 1274 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ALYREFQ86V81 257 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 PROSER1Q86XN7 944 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 MED8Q96G25 268 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 MARK4Q96L34 752 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CDK5RAP1Q96SZ6 601 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CLPBQ9H078 707 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 PPA2Q9H2U2 334 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ATXN3LQ9H3M9 355 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 UFSP2Q9NUQ7 469 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 PSMD13Q9UNM6 376 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ZNF510Q9Y2H8 683 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ANKRD34BA5PLL1 514 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TSTD3H0UI37 97 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 H7C0S8 307 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 M0R036 132 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 MDM4O15151 490 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TCF4P15884 667 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 AFF1P51825 1210 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SLC18A2Q05940 514 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 GALEQ14376 348 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FAM83EQ2M2I3 478 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 AGKQ53H12 422 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RAP1GAP2Q684P5 730 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 MRNIPQ6NTE8 343 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 DPY19L3Q6ZPD9 716 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ECHDC2Q86YB7 292 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ZDHHC13Q8IUH4 622 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ANKRD53Q8N9V6 530 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SRFBP1Q8NEF9 429 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TMIEQ8NEW7 156 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 COQ8AQ8NI60 647 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RAB2BQ8WUD1 216 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 S100A13Q99584 98 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 OSMRQ99650 979 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TGIF2Q9GZN2 237 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 WDR41Q9HAD4 459 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 GPRC5CQ9NQ84 441 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 KCNK4Q9NYG8 393 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ACTR10Q9NZ32 417 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CDH9Q9ULB4 789 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SALL3Q9BXA9 1300 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 A0A0U1RQJ8 604 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 GNG14A0A1W2PPG7 69 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 STAU1O95793 577 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 RAB3BP20337 219 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 MATN1P21941 496 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 YWHAQP27348 245 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 SHMT1P34896 483 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 PTPN9P43378 593 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 SLC1A6P48664 564 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 MAN2A2P49641 1150 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 CUL2Q13617 745 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 IL18Q14116 193 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 FNDC3BQ53EP0 1204 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 TCEAL6Q6IPX3 200 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 CDC73Q6P1J9 531 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 DOK6Q6PKX4 331 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 SLC30A10Q6XR72 485 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 MSANTD1Q6ZTZ1 278 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 TRMT11Q7Z4G4 463 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 NT5DC3Q86UY8 548 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 ZNF677Q86XU0 584 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 EPHX4Q8IUS5 362 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 CADM2Q8N3J6 435 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 RIT1Q92963 219 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 ARMC5Q96C12 935 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 AP1S3Q96PC3 154 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 PAFAH2Q99487 392 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 HIPK3Q9H422 1215 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 SLA2Q9H6Q3 261 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 FBXO6Q9NRD1 293 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 PLK2Q9NYY3 685 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 CBY3A6NI87 242 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 CAPGP40121 348 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 YWHAZP63104 245 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 BTN1A1Q13410 526 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 KCNJ8Q15842 424 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 USP39Q53GS9 565 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 LIN54Q6MZP7 749 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 RGMBQ6NW40 437 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 TLDC1Q6P9B6 456 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 MPZL3Q6UWV2 235 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 STRA8Q7Z7C7 330 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 EMC1Q8N766 993 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 B3GALNT2Q8NCR0 500 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 ACTRT1Q8TDG2 376 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 ZNF350Q9GZX5 532 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 PDGFCQ9NRA1 345 aa6.97□□□□□ -1.29
TGFBR3-210ENST00000533089 PNO1Q9NRX1 252 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms