RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 PCYOX1Q9UHG3 505 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 REXO2Q9Y3B8 237 aaKnown RBP7.97□□□□□ -1.13
CTNND1-230ENST00000532245 SCN7AQ01118 1682 aa7.97□□□□□ -1.13
CTNND1-230ENST00000532245 URADA6NGE7 173 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 MAN2B1O00754 1011 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 PMM2O15305 246 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 OR10H2O60403 315 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 MMP20O60882 483 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 GCATO75600 419 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 PRKAG1P54619 331 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 CYP4F2P78329 520 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 LPAL2Q16609 132 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 TCEAL5Q5H9L2 206 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 WDR45BQ5MNZ6 344 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 RPAINQ86UA6 219 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 HORMAD1Q86X24 394 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 DEFB123Q8N688 67 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 OR2AP1Q8NGE2 309 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 LCN9Q8WX39 176 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 NAF1Q96HR8 494 aaKnown RBP7.96□□□□□ -1.13
CTNND1-230ENST00000532245 LMLNQ96KR4 655 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 KCNE2Q9Y6J6 123 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 N4BP2Q86UW6 1770 aaPredicted RBP7.96□□□□□ -1.13
CTNND1-230ENST00000532245 TNRC6CQ9HCJ0 1690 aaKnown RBP7.96□□□□□ -1.13
CTNND1-230ENST00000532245 HNRNPCL2B2RXH8 293 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 HNRNPCL1O60812 293 aaKnown RBP7.96□□□□□ -1.13
CTNND1-230ENST00000532245 CNTN5O94779 1100 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 CCR4P51679 360 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 SEC24CP53992 1094 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 RAB10P61026 200 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 DSG1Q02413 1049 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 RPL6Q02878 288 aaKnown RBP7.96□□□□□ -1.13
CTNND1-230ENST00000532245 SLC10A7Q0GE19 358 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 SERPINA9Q86WD7 417 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 ICA1LQ8NDH6 482 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 STYXQ8WUJ0 223 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 OVCA2Q8WZ82 227 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 DNAJC1Q96KC8 554 aaKnown RBP7.96□□□□□ -1.13
CTNND1-230ENST00000532245 L2HGDHQ9H9P8 463 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 CAB39LQ9H9S4 337 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 DTLQ9NZJ0 730 aa7.96□□□□□ -1.13
CTNND1-230ENST00000532245 WNT9AO14904 365 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 UBDO15205 165 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 DDX3YO15523 660 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 GUCY1B2O75343 617 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 SLC8A1P32418 973 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CCNHP51946 323 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CRYMQ14894 314 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 PITRM1Q5JRX3 1037 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 WDR93Q6P2C0 686 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 OLFML1Q6UWY5 402 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF852Q6ZMS4 543 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 GPRIN1Q7Z2K8 1008 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ADAMTSL2Q86TH1 951 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 TSEN2Q8NCE0 465 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CEP70Q8NHQ1 597 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 PIGKQ92643 395 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 NTAN1Q96AB6 310 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 APOPT1Q96IL0 206 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 THTPAQ9BU02 230 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 HAPLN2Q9GZV7 340 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CDH19Q9H159 772 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF556Q9HAH1 456 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 VWA7Q9Y334 891 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 BCLAF3A2AJT9 711 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF840PA6NDX5 716 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 B2RBV5 119 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 HAS3O00219 553 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 TM9SF1O15321 606 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 RGS14O43566 566 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ACP5P13686 325 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 MLLT6P55198 1093 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 GHRHRQ02643 423 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ESRP1Q6NXG1 681 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 DNAJC14Q6Y2X3 702 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 FAM129CQ86XR2 697 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ZBTB2Q8N680 514 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CRYGNQ8WXF5 182 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 GFM2Q969S9 779 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CATSPER2Q96P56 530 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 XYLT2Q9H1B5 865 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 POLR3BQ9NW08 1133 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 NPEPPSL1A6NEC2 478 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 SERPINI2O75830 405 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 RUNX3Q13761 415 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 DMC1Q14565 340 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CPSF6Q16630 551 aaKnown RBP eCLIP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 MYLK3Q32MK0 819 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ATAD3BQ5T9A4 648 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 LRRC8BQ6P9F7 803 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 SLC30A9Q6PML9 568 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 PATL1Q86TB9 770 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 C17orf64Q86WR6 236 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 IFNLR1Q8IU57 520 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 DACT3Q96B18 629 aaPredicted RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 PLEKHA8Q96JA3 519 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 QRFPRQ96P65 431 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 CCT8L2Q96SF2 557 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 RIOK2Q9BVS4 552 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 EPN3Q9H201 632 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms