RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MAML2Q8IZL2 1156 aaPredicted RBP12.54□□□□□ -0.4
COPB1-208ENST00000532088 PGBD3Q8N328 593 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
COPB1-208ENST00000532088 KDF1Q8NAX2 398 aaPredicted RBP12.54□□□□□ -0.4
COPB1-208ENST00000532088 LRRN4CLQ8ND94 238 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 BRSK1Q8TDC3 778 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
COPB1-208ENST00000532088 NELL1Q92832 810 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 PEX13Q92968 403 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 LRRC39Q96DD0 335 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 SERPINB12Q96P63 405 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 RANBP9Q96S59 729 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 TRIM31Q9BZY9 425 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 BTBD1Q9H0C5 482 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 TSPYL1Q9H0U9 437 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 SLC6A17Q9H1V8 727 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 NEUROG2Q9H2A3 272 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 EPB41L5Q9HCM4 733 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 PCDH12Q9NPG4 1184 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 KCTD5Q9NXV2 234 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
COPB1-208ENST00000532088 RIMKLBQ9ULI2 386 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 PLXND1Q9Y4D7 1925 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 LRRC72A6NJI9 287 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 EIF3HO15372 352 aaKnown RBP eCLIP12.53□□□□□ -0.4
COPB1-208ENST00000532088 ST8SIA5O15466 376 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 SPINT1O43278 529 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 PSMA3P25788 255 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 TNFRSF8P28908 595 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 CD6P30203 668 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 CNR2P34972 360 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 NUDT1P36639 197 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 CHRNA4P43681 627 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 ADPRHP54922 357 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 TAS2R38P59533 333 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 MRPS25P82663 173 aaKnown RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 CREB5Q02930 508 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 SPARCL1Q14515 664 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 CDKN3Q16667 212 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 DNAJC21Q5F1R6 531 aaKnown RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 SLC36A4Q6YBV0 504 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 NLRP9Q7RTR0 991 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 KDELC2Q7Z4H8 507 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 CAND1Q86VP6 1230 aaKnown RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 CBARPQ8N350 705 aaPredicted RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 DNAAF3Q8N9W5 541 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 OR52K1Q8NGK4 314 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 OR2T34Q8NGX1 318 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 GANCQ8TET4 914 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 UBXN4Q92575 508 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 SPACA7Q96KW9 195 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 IL22Q9GZX6 179 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 MRM3Q9HC36 420 aaKnown RBP12.53□□□□□ -0.4
COPB1-208ENST00000532088 ZDHHC18Q9NUE0 388 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 BFARQ9NZS9 450 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 B4GALT6Q9UBX8 382 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 BDP1A6H8Y1 2624 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 KMT2EQ8IZD2 1858 aa12.53□□□□□ -0.4
COPB1-208ENST00000532088 IGHV1OR15-9A0A0B4J2B8 117 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 HEATR9A2RTY3 570 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 RGSL1A5PLK6 1076 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 NPIPB15A6NHN6 443 aaPredicted RBP12.52□□□□□ -0.41
COPB1-208ENST00000532088 E7ESA3 106 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 LCE2BO14633 110 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 USP12O75317 370 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 CRTAMO95727 393 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 RHOXF2BP0C7M4 288 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 MCM3P25205 808 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 HNF1BP35680 557 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 HMGCLP35914 325 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 GRIA1P42261 906 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 ARL4CP56559 192 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 RALGDSQ12967 914 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 ARHGEF7Q14155 803 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 TAF1AQ15573 450 aaPredicted RBP12.52□□□□□ -0.41
COPB1-208ENST00000532088 HIF1AQ16665 826 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 POM121L1PQ3SYA9 428 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 SPDYCQ5MJ68 293 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 ZDHHC20Q5W0Z9 365 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 CRTC1Q6UUV9 634 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 ZDHHC24Q6UX98 284 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 TMC3Q7Z5M5 1100 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 TRIM69Q86WT6 500 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 CCNJLQ8IV13 435 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 PDIK1LQ8N165 341 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 SLC25A41Q8N5S1 370 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 CADM4Q8NFZ8 388 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 DTX3LQ8TDB6 740 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 PRRX2Q99811 253 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 APOL2Q9BQE5 337 aa12.52□□□□□ -0.41
COPB1-208ENST00000532088 RHOXF2Q9BQY4 288 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms