RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SPEM2Q0P670 501 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 SGCGQ13326 291 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 WSCD2Q2TBF2 565 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 LRRC66Q68CR7 880 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 KYAT3Q6YP21 454 aaKnown RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 GCNT7Q6ZNI0 430 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 ZNF572Q7Z3I7 529 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 TMC3Q7Z5M5 1100 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 PRUNE1Q86TP1 453 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 NLRP8Q86W28 1048 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 CCDC89Q8N998 374 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 IPMKQ8NFU5 416 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 KLK6Q92876 244 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 RMDN1Q96DB5 314 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 BMFQ96LC9 184 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 C19orf43Q9BQ61 176 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 C1QTNF7Q9BXJ2 289 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 TRABDQ9H4I3 376 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 LRRC40Q9H9A6 602 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 ETNK1Q9HBU6 452 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 EIF2B3Q9NR50 452 aaKnown RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 NFKBIL1Q9UBC1 381 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 FEZ2Q9UHY8 353 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 SLC6A14Q9UN76 642 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 MYLKQ15746 1914 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 TMEM131Q92545 1883 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 RGSL1A5PLK6 1076 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 GOLGA6CA6NDK9 693 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 GOLGA6BA6NDN3 693 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-206ENST00000531480 CCDC188H7C350 402 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 URI1O94763 535 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-206ENST00000531480 C1SP09871 688 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 ZSCAN5DPP0CG00 497 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 GOLGA6DP0CG33 693 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 TEAD1P28347 426 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 IGFALSP35858 605 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 TRIM23P36406 574 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 PAFAH1B1P43034 410 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 CHRNA4P43681 627 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 PFN3P60673 137 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 IRX4P78413 519 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 CKAP4Q07065 602 aaKnown RBP14.47□□□□□ -0.09
CPSF1-206ENST00000531480 ARHGEF7Q14155 803 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 TRIM61Q5EBN2 209 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 CCDC70Q6NSX1 233 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 ESRP1Q6NXG1 681 aaKnown RBP14.47□□□□□ -0.09
CPSF1-206ENST00000531480 ZNF765Q7L2R6 523 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 KDELC2Q7Z4H8 507 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 HSD11B1LQ7Z5J1 315 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 PAF1Q8N7H5 531 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 PDCD7Q8N8D1 485 aaKnown RBP14.47□□□□□ -0.09
CPSF1-206ENST00000531480 GRK7Q8WTQ7 553 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 DTD2Q96FN9 168 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 CAPZA3Q96KX2 299 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 TBL1YQ9BQ87 522 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 FICDQ9BVA6 458 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 FSD1LQ9BXM9 530 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 ZDHHC5Q9C0B5 715 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 MIR1-1HGQ9H1L0 117 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 GOLGA6AQ9NYA3 693 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 HACD3Q9P035 362 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 COQ6Q9Y2Z9 468 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 SPO11Q9Y5K1 396 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 DMXL1Q9Y485 3027 aa14.47□□□□□ -0.09
CPSF1-206ENST00000531480 A0A0U1RQS6 177 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 C1orf232A0A0U1RR37 186 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 LNP1A1A4G5 178 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 POM121BA6NF01 834 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 A8MX80 341 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 KHNYNO15037 678 aaKnown RBP14.46□□□□□ -0.09
CPSF1-206ENST00000531480 CLDN7O95471 211 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 HMGCLP35914 325 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 CSNK1EP49674 416 aaKnown RBP14.46□□□□□ -0.09
CPSF1-206ENST00000531480 OLIG2Q13516 323 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 STAT4Q14765 748 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 LRRC14Q15048 493 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 IRF4Q15306 451 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 TEAD4Q15561 434 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 FAXCQ5TGI0 409 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 PRR23CQ6ZRP0 262 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 GSTA5Q7RTV2 222 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 LYSMD3Q7Z3D4 306 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 NRSN1Q8IZ57 195 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 TTC30BQ8N4P2 665 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 CEP112Q8N8E3 955 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 DTX3LQ8TDB6 740 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 RUNDC3BQ96NL0 473 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 DDX47Q9H0S4 455 aaKnown RBP14.46□□□□□ -0.09
CPSF1-206ENST00000531480 CDH19Q9H159 772 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 SMOC1Q9H4F8 434 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 ZFYVE1Q9HBF4 777 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 FZD3Q9NPG1 666 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 MBNL1Q9NR56 388 aaKnown RBP14.46□□□□□ -0.09
CPSF1-206ENST00000531480 RAB6BQ9NRW1 208 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 ZNF711Q9Y462 761 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 LRP4O75096 1905 aa14.46□□□□□ -0.09
CPSF1-206ENST00000531480 DNAH14Q0VDD8 3507 aa14.46□□□□□ -0.1
CPSF1-206ENST00000531480 A6NNZ2 444 aa14.45□□□□□ -0.1
CPSF1-206ENST00000531480 H0Y8X5 98 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms