RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MLLT10P55197 1068 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 HDAC4P56524 1084 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 NOMO3P69849 1222 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 SERINC3Q13530 473 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 KLHDC7AQ5VTJ3 777 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 LIPIQ6XZB0 460 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 MARK2Q7KZI7 788 aaKnown RBP9.25□□□□□ -0.93
NEDD8-206ENST00000531430 STRADAQ7RTN6 431 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 BNIPLQ7Z465 357 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 PELI3Q8N2H9 469 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 TEX19Q8NA77 164 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 TSEN2Q8NCE0 465 aaKnown RBP9.25□□□□□ -0.93
NEDD8-206ENST00000531430 SLC20A1Q8WUM9 679 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 APOBEC4Q8WW27 367 aaKnown RBP9.25□□□□□ -0.93
NEDD8-206ENST00000531430 SLC38A3Q99624 504 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 CINPQ9BW66 212 aaPredicted RBP9.25□□□□□ -0.93
NEDD8-206ENST00000531430 TMEM9Q9P0T7 183 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 KLHL3Q9UH77 587 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 SUFUQ9UMX1 484 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 PLEKHM1Q9Y4G2 1056 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 PCDHGA3Q9Y5H0 932 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 LRRK1Q38SD2 2015 aa9.25□□□□□ -0.93
NEDD8-206ENST00000531430 ANKRD62A6NC57 917 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 PRR19A6NJB7 356 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 C2CD4BA6NLJ0 364 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 DFFAO00273 331 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 CAPN5O15484 640 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-206ENST00000531430 KATNA1O75449 491 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 TCN2P20062 427 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 NR1D1P20393 614 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 MAP4P27816 1152 aaKnown RBP9.24□□□□□ -0.93
NEDD8-206ENST00000531430 ACTR1BP42025 376 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 RGRP47804 291 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 PAPOLAP51003 745 aaKnown RBP9.24□□□□□ -0.93
NEDD8-206ENST00000531430 ACTR1AP61163 376 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 CTBSQ01459 385 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 TRA2AQ13595 282 aaKnown RBP eCLIP9.24□□□□□ -0.93
NEDD8-206ENST00000531430 AGERQ15109 404 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 PARP15Q460N3 678 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 LACTB2Q53H82 288 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-206ENST00000531430 ATP1A1-AS1Q5TC04 95 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 TMEM71Q6P5X7 295 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 WDR59Q6PJI9 974 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 ARCQ7LC44 396 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 HEATR4Q86WZ0 1026 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 NRROSQ86YC3 692 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 FAM114A1Q8IWE2 563 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 NLGN4XQ8N0W4 816 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 NLGN4YQ8NFZ3 816 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-206ENST00000531430 OR4D9Q8NGE8 314 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 NCSTNQ92542 709 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 NUS1Q96E22 293 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 TUBGCP2Q9BSJ2 902 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 STK33Q9BYT3 514 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 B3GNT4Q9C0J1 378 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 SLC39A8Q9C0K1 460 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 ADAM22Q9P0K1 906 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 TUBD1Q9UJT1 453 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 TMEM98Q9Y2Y6 226 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 ANKRD36A6QL64 1941 aa9.24□□□□□ -0.93
NEDD8-206ENST00000531430 IGHV1OR21-1A0A087WYE8 117 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 TSPAN11A1L157 253 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 CFAP69A5D8W1 941 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 ARHGAP42A6NI28 874 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 VPS4BO75351 444 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 AGFG2O95081 481 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 ASMTLO95671 621 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 FUCA1P04066 466 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 CEACAM5P06731 702 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 KRT7P08729 469 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 HOXC4P09017 264 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-206ENST00000531430 MYCLP1P12525 358 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-206ENST00000531430 UCHL3P15374 230 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 MMP8P22894 467 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 ERCC5P28715 1186 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-206ENST00000531430 TRIM23P36406 574 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 ADCY8P40145 1251 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 PTPN9P43378 593 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 GPR3P46089 330 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 TPI1P60174 286 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 CDC20Q12834 499 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 KLRB1Q12918 225 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 RALGDSQ12967 914 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 NFATC2Q13469 925 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 PEX6Q13608 980 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 SYCP1Q15431 976 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 AFMIDQ63HM1 303 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 RAET1GQ6H3X3 334 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 DPPA4Q7L190 304 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 NAGSQ8N159 534 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 OR10G6Q8NH81 332 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 PTCD2Q8WV60 388 aaKnown RBP9.23□□□□□ -0.93
NEDD8-206ENST00000531430 NTAN1Q96AB6 310 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 SLC45A3Q96JT2 553 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 PCMTD1Q96MG8 357 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-206ENST00000531430 TUBGCP5Q96RT8 1024 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 EFHD1Q9BUP0 239 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 DDA1Q9BW61 102 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 SP110Q9HB58 689 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 GPATCH2LQ9NWQ4 482 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms