RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ATMQ13315 3056 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 PDE2AO00408 941 aaPredicted RBP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 DDX3XO00571 662 aaKnown RBP eCLIP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 NVLO15381 856 aaKnown RBP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 HTRA2O43464 458 aaPredicted RBP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 PEX11BO96011 259 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 PNLIPP16233 465 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 ZFP36L1Q07352 338 aaKnown RBP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 ARHGEF7Q14155 803 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 HLTFQ14527 1009 aaKnown RBP eCLIP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 CBARPQ8N350 705 aaPredicted RBP12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 CCL4L1Q8NHW4 92 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 DPEP2Q9H4A9 486 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 HAUS4Q9H6D7 363 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 WDR70Q9NW82 654 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 PISDQ9UG56 409 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 MOSPD1Q9UJG1 213 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 ACSL6Q9UKU0 697 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 LOXL2Q9Y4K0 774 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 PCDHGC4Q9Y5F7 938 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 SCINQ9Y6U3 715 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 TENM4Q6N022 2769 aa12.83□□□□□ -0.36
TM9SF1-211ENST00000531406 FLNBO75369 2602 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 A0A1W2PQ67 120 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 PRSS38A1L453 326 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 B4DGG1 531 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 H3BRJ5 948 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 J3QKU1 62 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 NUDT21O43809 227 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 SOCS5O75159 536 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 JMJD7P0C870 316 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 CR2P20023 1033 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 IL1R2P27930 398 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 VIPR1P32241 457 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 PCK1P35558 622 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 HSPA9P38646 679 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 PRKCIP41743 596 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 B4GALNT1Q00973 533 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 ZNF235Q14590 738 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 TGIF1Q15583 401 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 CNGA3Q16281 694 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 E4F1Q66K89 784 aaPredicted RBP12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 PGBD5Q8N414 524 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 GPBAR1Q8TDU6 330 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 ZNF653Q96CK0 615 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 NUS1Q96E22 293 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 MED8Q96G25 268 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 NUDCD1Q96RS6 583 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 TEX101Q9BY14 249 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 ZWILCHQ9H900 591 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 NOD2Q9HC29 1040 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 SPATS2LQ9NUQ6 558 aaKnown RBP12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 ETNK2Q9NVF9 386 aa12.82□□□□□ -0.36
TM9SF1-211ENST00000531406 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 B8ZZF3 427 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 AGRPO00253 132 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 B4GAT1O43505 415 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 HEXIM1O94992 359 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 CPP00450 1065 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 FUCA1P04066 466 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 CEACAM5P06731 702 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 TPM1P09493 284 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 MYCLP1P12525 358 aaPredicted RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 CCNB1P14635 433 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 AMPD1P23109 780 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 ARL4AP40617 200 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 ETV3P41162 512 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 KLHL30Q0D2K2 578 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 TRIM14Q14142 442 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 DPYSL2Q16555 572 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 BOLA3Q53S33 107 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 TMPRSS9Q7Z410 1059 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 POLNQ7Z5Q5 900 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 HEATR4Q86WZ0 1026 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 NRROSQ86YC3 692 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 SLITRK4Q8IW52 837 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 KIAA1524Q8TCG1 905 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 PDCD6IPQ8WUM4 868 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 TMEM159Q96B96 161 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 TRIM11Q96F44 468 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 CARS2Q9HA77 564 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 MRPL47Q9HD33 250 aaKnown RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 PHPT1Q9NRX4 125 aaPredicted RBP12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 KCTD5Q9NXV2 234 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 MYO1AQ9UBC5 1043 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 SHROOM3Q8TF72 1996 aa12.81□□□□□ -0.36
TM9SF1-211ENST00000531406 A0A1W2PQC6 194 aa12.8□□□□□ -0.36
TM9SF1-211ENST00000531406 MAFKO60675 156 aa12.8□□□□□ -0.36
TM9SF1-211ENST00000531406 FGF1P05230 155 aa12.8□□□□□ -0.36
TM9SF1-211ENST00000531406 MYBL1P10243 752 aa12.8□□□□□ -0.36
TM9SF1-211ENST00000531406 LIPCP11150 499 aa12.8□□□□□ -0.36
TM9SF1-211ENST00000531406 CYP2A6P11509 494 aaPredicted RBP12.8□□□□□ -0.36
TM9SF1-211ENST00000531406 SKILP12757 684 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms