RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 LYSMD1Q96S90 227 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 NAT9Q9BTE0 207 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 PLAC1Q9HBJ0 212 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 SPATA6Q9NWH7 488 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-205ENST00000531303 IL1RAPL1Q9NZN1 696 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 SCML1Q9UN30 329 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 FADS3Q9Y5Q0 445 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 LRRK1Q38SD2 2015 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 AREL1O15033 823 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 PCDH8O95206 1070 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 TTC4O95801 387 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 AOC1P19801 751 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 CXCL12P48061 93 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 TPMTP51580 245 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 SUOXP51687 545 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 ZNF140P52738 457 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-205ENST00000531303 TAS2R38P59533 333 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 PTSQ03393 145 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 ELP6Q0PNE2 266 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 CRYMQ14894 314 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 BEND6Q5SZJ8 279 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-205ENST00000531303 RFLNAQ6ZTI6 216 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 CCNJLQ8IV13 435 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 UNC5BQ8IZJ1 945 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 RAB7BQ96AH8 199 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 TTC25Q96NG3 672 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 TPSD1Q9BZJ3 242 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 MRM3Q9HC36 420 aaKnown RBP19.05■□□□□ 0.64
SMPD1-205ENST00000531303 ARFGAP3Q9NP61 516 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 EBF1Q9UH73 591 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 PKP3Q9Y446 797 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 CACNA1IQ9P0X4 2223 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 TRPM6Q9BX84 2022 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 DOCK9Q9BZ29 2069 aa19.05■□□□□ 0.64
SMPD1-205ENST00000531303 FAM47DPA6NHR8 397 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 MMP20O60882 483 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 USP1O94782 785 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 APBB3O95704 486 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 C1SP09871 688 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 ELFN1P0C7U0 828 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 HSD17B3P37058 310 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 LIG3P49916 1009 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 ACOX1Q15067 660 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 SKIDA1Q1XH10 827 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 SPANXN3Q5MJ09 141 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 NLRP9Q7RTR0 991 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 HSD11B1LQ7Z5J1 315 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 TMEM135Q86UB9 458 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMPD1-205ENST00000531303 CXorf40AQ8TE69 158 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 STYXQ8WUJ0 223 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 HNRNPLLQ8WVV9 542 aaKnown RBP19.04■□□□□ 0.64
SMPD1-205ENST00000531303 SUDS3Q9H7L9 328 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-205ENST00000531303 PPANQ9NQ55 473 aaKnown RBP19.04■□□□□ 0.64
SMPD1-205ENST00000531303 DLGAP2Q9P1A6 1054 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 COQ6Q9Y2Z9 468 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 ZDBF2Q9HCK1 2354 aa19.04■□□□□ 0.64
SMPD1-205ENST00000531303 GOLGA8KD6RF30 607 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 GOLGA8TH3BQL2 631 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 RIPK2O43353 540 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 VAPBO95292 243 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 HMGCLP35914 325 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ARSDP51689 593 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 PDE1BQ01064 536 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 SFSWAPQ12872 951 aaKnown RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 UAP1Q16222 522 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ALS2CLQ60I27 953 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 STEAP4Q687X5 459 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TRMT10BQ6PF06 316 aaKnown RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 LIPIQ6XZB0 460 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 USP30Q70CQ3 517 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 OR13J1Q8NGT2 312 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 OR6P1Q8NGX9 317 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 HDAC10Q969S8 669 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ZBTB9Q96C00 473 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBATAQ96M53 351 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ITM2CQ9NQX7 267 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TREX1Q9NSU2 369 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 NLE1Q9NVX2 485 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 IL17CQ9P0M4 197 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 CD84Q9UIB8 345 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 FKBPLQ9UIM3 349 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 CYP8B1Q9UNU6 501 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 SCN8AQ9UQD0 1980 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3DA0A087WVF3 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3IA0A087WXS9 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3EA0A087X179 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3KA0A087X1G2 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ZCWPW2A0A1B0GU75 182 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3FA6NER0 549 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3LB9A6J9 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 PIAS1O75925 651 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 PAPSS2O95340 614 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-205ENST00000531303 TBC1D3HP0C7X1 549 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ERVK-10P10266 1014 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ZNF30P17039 623 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 CCR3P51677 355 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 STC1P52823 247 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 ADPRHP54922 357 aa19.03■□□□□ 0.64
SMPD1-205ENST00000531303 PRAMEP78395 509 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms