RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 TYROBPO43914 113 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 RPP40O75818 363 aaKnown RBP21.24■□□□□ 0.99
VPS28-212ENST00000530836 ZWINTO95229 277 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 KAT7O95251 611 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 CHRNB1P11230 501 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 CREB1P16220 341 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 AOC1P19801 751 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 LPOP22079 712 aaPredicted RBP21.24■□□□□ 0.99
VPS28-212ENST00000530836 GRIA2P42262 883 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 CCINQ13939 588 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 TERF2Q15554 542 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 MROH9Q5TGP6 573 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 FBXL6Q8N531 539 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 PIH1D2Q8WWB5 315 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 SCG3Q8WXD2 468 aaKnown RBP21.24■□□□□ 0.99
VPS28-212ENST00000530836 LRIG1Q96JA1 1093 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 MRGPRX3Q96LB0 322 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 NLE1Q9NVX2 485 aaPredicted RBP21.24■□□□□ 0.99
VPS28-212ENST00000530836 MKS1Q9NXB0 559 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 ARL5AQ9Y689 179 aa21.24■□□□□ 0.99
VPS28-212ENST00000530836 FOXO6A8MYZ6 492 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 PRR33A8MZF0 331 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 TM9SF1O15321 606 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 PI15O43692 258 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 APODP05090 189 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 CCNHP51946 323 aaPredicted RBP21.23■□□□□ 0.99
VPS28-212ENST00000530836 TMEM31Q5JXX7 168 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 NUDT18Q6ZVK8 323 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 C4orf33Q8N1A6 199 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 PAF1Q8N7H5 531 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 BANPQ8N9N5 519 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 C2CD4AQ8NCU7 369 aaPredicted RBP21.23■□□□□ 0.99
VPS28-212ENST00000530836 FRS2Q8WU20 508 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 CLDN23Q96B33 292 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 MCMBPQ9BTE3 642 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 RHOJQ9H4E5 214 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 LMAN1LQ9HAT1 526 aa21.23■□□□□ 0.99
VPS28-212ENST00000530836 HMX2A2RU54 273 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 EGFP01133 1207 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 CCNFP41002 786 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 ZNF140P52738 457 aaPredicted RBP21.22■□□□□ 0.99
VPS28-212ENST00000530836 GNGT1P63211 74 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 GUCY1A3Q02108 690 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 KDSRQ06136 332 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 E2F5Q15329 346 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 DPY19L3Q6ZPD9 716 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SH2D5Q6ZV89 423 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 OR6K2Q8NGY2 324 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 MDM1Q8TC05 714 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 UCMAQ8WVF2 138 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 EZH1Q92800 747 aaPredicted RBP21.22■□□□□ 0.99
VPS28-212ENST00000530836 HDAC10Q969S8 669 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 ECHDC3Q96DC8 303 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 APOPT1Q96IL0 206 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SERAC1Q96JX3 654 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SUV39H2Q9H5I1 410 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 PHTF1Q9UMS5 762 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SPO11Q9Y5K1 396 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 A0A0J9YYE9 177 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 TBC1D3BA6NDS4 549 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 K7EQS6 105 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 RFPL1O75677 317 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 PIGNO95427 931 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 TRBC1P01850 177 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 PIRTP0C851 137 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SLC8A1P32418 973 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 TNFRSF4P43489 277 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 POLR2LP62875 67 aaKnown RBP21.22■□□□□ 0.99
VPS28-212ENST00000530836 BMPR2Q13873 1038 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 LRRC32Q14392 662 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 FBXO43Q4G163 708 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SYNPOQ8N3V7 929 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 TERB1Q8NA31 727 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 MDGA1Q8NFP4 955 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 OR2A12Q8NGT7 310 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 GPR150Q8NGU9 434 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 OR6P1Q8NGX9 317 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 ISL2Q96A47 359 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 CABS1Q96KC9 395 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 HEPHQ9BQS7 1158 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 OSBPL1AQ9BXW6 950 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 SLC17A6Q9P2U8 582 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 PPIL1Q9Y3C6 166 aa21.22■□□□□ 0.99
VPS28-212ENST00000530836 GOLGA8TH3BQL2 631 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 PRKCGP05129 697 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 DCNP07585 359 aaKnown RBP21.21■□□□□ 0.99
VPS28-212ENST00000530836 PYGBP11216 843 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 NFKBIAP25963 317 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 RPS9P46781 194 aaKnown RBP21.21■□□□□ 0.99
VPS28-212ENST00000530836 SERPINB8P50452 374 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 SEPT7Q16181 437 aaKnown RBP21.21■□□□□ 0.99
VPS28-212ENST00000530836 PTPRNQ16849 979 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 ZNF470Q6ECI4 717 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 MRNIPQ6NTE8 343 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 Q6ZVU0 165 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 ZC3HC1Q86WB0 502 aaKnown RBP21.21■□□□□ 0.99
VPS28-212ENST00000530836 SFTPA1Q8IWL2 248 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 CYB5D2Q8WUJ1 264 aa21.21■□□□□ 0.99
VPS28-212ENST00000530836 DNAJC1Q96KC8 554 aaKnown RBP21.21■□□□□ 0.99
VPS28-212ENST00000530836 LYSMD1Q96S90 227 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms