RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SQSTM1Q13501 440 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 CDO1Q16878 200 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 PARP15Q460N3 678 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 NKAIN2Q5VXU1 208 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 CAPRIN2Q6IMN6 1127 aaKnown RBP10.44□□□□□ -0.74
COPB1-207ENST00000529866 TMEM71Q6P5X7 295 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 ASB18Q6ZVZ8 466 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 CCDC13Q8IYE1 715 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 UNC5BQ8IZJ1 945 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 ESX1Q8N693 406 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 RTL3Q8N8U3 475 aaKnown RBP10.44□□□□□ -0.74
COPB1-207ENST00000529866 OR10G6Q8NH81 332 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 CLSTN2Q9H4D0 955 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 ATP13A3Q9H7F0 1226 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 PHPT1Q9NRX4 125 aaPredicted RBP10.44□□□□□ -0.74
COPB1-207ENST00000529866 OCIAD1Q9NX40 245 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 UBA2Q9UBT2 640 aaPredicted RBP10.44□□□□□ -0.74
COPB1-207ENST00000529866 NEU3Q9UQ49 428 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 FHOD1Q9Y613 1164 aa10.44□□□□□ -0.74
COPB1-207ENST00000529866 LOC101059948A0A1B0GTJ6 334 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 GTPBP10A4D1E9 387 aaKnown RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 TTLL8A6PVC2 850 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 FOXN3O00409 490 aaPredicted RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 TEX33O43247 280 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 RFPL1O75677 317 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 STK17BO94768 372 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 PRKCGP05129 697 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 PLEKP08567 350 aaPredicted RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 GNLYP22749 145 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 ERCC5P28715 1186 aaPredicted RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 MTIF2P46199 727 aaKnown RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 GNPDA1P46926 289 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 YBEYP58557 167 aaPredicted RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 TRNP1Q6NT89 227 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 PNCKQ6P2M8 343 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 SLC30A9Q6PML9 568 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 BMPERQ8N8U9 685 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 NETO2Q8NC67 525 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 LGR4Q9BXB1 951 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 METTL5Q9NRN9 209 aaKnown RBP10.43□□□□□ -0.74
COPB1-207ENST00000529866 LHX3Q9UBR4 397 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 TMEM59LQ9UK28 342 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 DNAJC12Q9UKB3 198 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 POLHQ9Y253 713 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 KCNMB2Q9Y691 235 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 C2CD3Q4AC94 2353 aa10.43□□□□□ -0.74
COPB1-207ENST00000529866 RASA4BC9J798 803 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 FAM72CH0Y354 149 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 RASA4O43374 803 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 DDAH2O95865 285 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 NR1D1P20393 614 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 AK4P27144 223 aaPredicted RBP10.42□□□□□ -0.74
COPB1-207ENST00000529866 EPHB2P29323 1055 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 STAT5AP42229 794 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 POLR2LP62875 67 aaKnown RBP10.42□□□□□ -0.74
COPB1-207ENST00000529866 MC2RQ01718 297 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 RALGDSQ12967 914 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 MAP7Q14244 749 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 ACOX1Q15067 660 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 MAN2A1Q16706 1144 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 C2CD6Q53TS8 623 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 ATP1A1-AS1Q5TC04 95 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 FAM72AQ5TYM5 149 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 FAM72DQ6L9T8 149 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 LIPIQ6XZB0 460 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 DPPA4Q7L190 304 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 FAM72BQ86X60 149 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 NRROSQ86YC3 692 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 CAMK1DQ8IU85 385 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 NAGSQ8N159 534 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 EMC1Q8N766 993 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 MLKLQ8NB16 471 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 CPT1CQ8TCG5 803 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 NUS1Q96E22 293 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 SLC38A3Q99624 504 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 CTRCQ99895 268 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 STN1Q9H668 368 aaKnown RBP10.42□□□□□ -0.74
COPB1-207ENST00000529866 CATSPERBQ9H7T0 1116 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 KCTD5Q9NXV2 234 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 DONSONQ9NYP3 566 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 CHMP5Q9NZZ3 219 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 TMEM9Q9P0T7 183 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 PDP2Q9P2J9 529 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 SUFUQ9UMX1 484 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 TMEM184BQ9Y519 407 aaPredicted RBP10.42□□□□□ -0.74
COPB1-207ENST00000529866 RPS6KL1Q9Y6S9 549 aa10.42□□□□□ -0.74
COPB1-207ENST00000529866 A1L4Q6 167 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 POLR1CO15160 346 aaPredicted RBP10.41□□□□□ -0.74
COPB1-207ENST00000529866 PPM1DO15297 605 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 INPP4BO15327 924 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 CEACAM5P06731 702 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 CYP11B1P15538 503 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 NFKBIAP25963 317 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 ACTR1BP42025 376 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 ACTR1AP61163 376 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 CTBSQ01459 385 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 BCL2L1Q07817 233 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 CYTH1Q15438 398 aa10.41□□□□□ -0.74
COPB1-207ENST00000529866 C15orf59Q2T9L4 293 aaPredicted RBP10.41□□□□□ -0.74
COPB1-207ENST00000529866 VWA3BQ502W6 1294 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms