RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 FAM72CH0Y354 149 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 PLD2O14939 933 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ZNF185O15231 689 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 TSPAN6O43657 245 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 MMP20O60882 483 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 UGT2B4P06133 528 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FAM87AP0C7U9 286 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 GZMAP12544 262 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 RECQLP46063 649 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 CSRP3P50461 194 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 CYP4F2P78329 520 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 CBX1P83916 185 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 GNA12Q03113 381 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 DEUP1Q05D60 604 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 CCDC15Q0P6D6 951 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SGCGQ13326 291 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SPIDRQ14159 915 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 COLEC12Q5KU26 742 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 BEND6Q5SZJ8 279 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ATXN7L2Q5T6C5 722 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FAM72AQ5TYM5 149 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FAM72DQ6L9T8 149 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SLFN11Q7Z7L1 901 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 VASH2Q86V25 355 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FAM72BQ86X60 149 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FAM131BQ86XD5 332 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 XYLT1Q86Y38 959 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 RHOT2Q8IXI1 618 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FAM71AQ8IYT1 594 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SDR16C5Q8N3Y7 309 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 DENND6BQ8NEG7 585 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SPATA4Q8NEY3 305 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 PCDH19Q8TAB3 1148 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 HTR3CQ8WXA8 447 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ASB12Q8WXK4 309 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 TSACCQ96A04 125 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 GRAMD1AQ96CP6 724 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 CCDC97Q96F63 343 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 LIN37Q96GY3 246 aaPredicted RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 CFAP57Q96MR6 1250 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 KLHL32Q96NJ5 620 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 PACSIN1Q9BY11 444 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 FUT8Q9BYC5 575 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ZYG11BQ9C0D3 744 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ACBD3Q9H3P7 528 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 EPB41L5Q9HCM4 733 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ATP13A2Q9NQ11 1180 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 STARD5Q9NSY2 213 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SIRPGQ9P1W8 387 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 GMPR2Q9P2T1 348 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 GULP1Q9UBP9 304 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 COQ6Q9Y2Z9 468 aa8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 ZFC3H1O60293 1989 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 SPENQ96T58 3664 aaKnown RBP8.62□□□□□ -1.03
TGFBR3-208ENST00000529608 COL12A1Q99715 3063 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 D6RAR5 112 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 PDE2AO00408 941 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 KRIT1O00522 736 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 SUV39H1O43463 412 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 RPLP0P05388 317 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ANXA6P08133 673 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 TIMP2P16035 220 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 CDH5P33151 784 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 GABRB2P47870 512 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 THOP1P52888 689 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 BPIFB4P59827 614 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 GABPB1Q06547 395 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 MTA1Q13330 715 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 IRF4Q15306 451 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ALG11Q2TAA5 492 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 SLC25A52Q3SY17 297 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ZNF805Q5CZA5 627 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 FAXCQ5TGI0 409 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 MANEALQ5VSG8 457 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 RETSATQ6NUM9 610 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 LRRC31Q6UY01 552 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 MACC1Q6ZN28 852 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 RAB11FIP2Q7L804 512 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 NLRP14Q86W24 1093 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ZFAND4Q86XD8 727 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 JAMLQ86YT9 394 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 RYBPQ8N488 228 aaPredicted RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 FBXO39Q8N4B4 442 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 EMC1Q8N766 993 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 LRRC57Q8N9N7 239 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 OR2AP1Q8NGE2 309 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 COG1Q8WTW3 980 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 BTN2A2Q8WVV5 523 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ARHGEF2Q92974 986 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 WRAP53Q9BUR4 548 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 CPEB1Q9BZB8 566 aaKnown RBP8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 KLC2Q9H0B6 622 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ISCUQ9H1K1 167 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 VIPAS39Q9H9C1 493 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 NCKIPSDQ9NZQ3 722 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 FOXJ2Q9P0K8 574 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 TMEM59LQ9UK28 342 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 ACSL6Q9UKU0 697 aa8.61□□□□□ -1.03
TGFBR3-208ENST00000529608 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms