RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SLC7A4O43246 635 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 RASA4O43374 803 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PRPSAP2O60256 369 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 LEFTY1O75610 366 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3HP0C7X1 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 DESP17661 470 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 GNLYP22749 145 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 HTR7P34969 479 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PCK1P35558 622 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 CCR5P51681 352 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 POLE2P56282 527 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TPI1P60174 286 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PPP2CBP62714 309 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PPP2CAP67775 309 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBX2Q13207 712 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TRIM14Q14142 442 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 ISXQ2M1V0 245 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PRAMEF14Q5SWL7 426 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PIP5KL1Q5T9C9 394 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3GQ6DHY5 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TXNRD3NBQ6F5E7 133 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3CQ6IPX1 549 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 SARM1Q6SZW1 724 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 SPNS3Q6ZMD2 512 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 LEKR1Q6ZMV7 388 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PSTKQ8IV42 348 aaKnown RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 TBC1D3Q8IZP1 549 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 NIPA2Q8N8Q9 360 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 GALNT11Q8NCW6 608 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 GRAMD1AQ96CP6 724 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 HMCESQ96FZ2 354 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 CCDC114Q96M63 670 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 EIF3CQ99613 913 aaKnown RBP8.56□□□□□ -1.04
SSBP3-212ENST00000528930 CHP1Q99653 195 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 HEPHQ9BQS7 1158 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 NUP85Q9BW27 656 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PACSIN1Q9BY11 444 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 LRRC19Q9H756 370 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 CATSPERBQ9H7T0 1116 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 ABHD10Q9NUJ1 306 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 IL36AQ9UHA7 158 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 ACSL6Q9UKU0 697 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 ZKSCAN5Q9Y2L8 839 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 PCDHB11Q9Y5F2 797 aa8.56□□□□□ -1.04
SSBP3-212ENST00000528930 A0A1W2PR77 199 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 ZSCAN5CA6NGD5 496 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 EEF2KO00418 725 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 KPNA3O00505 521 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 LATO43561 262 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 BUB1O43683 1085 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 MFAP3LO75121 409 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 GSRP00390 522 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 PRNPP04156 253 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 WNT1P04628 370 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 KRT7P08729 469 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 RARAP10276 462 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 ERCC2P18074 760 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 WT1P19544 449 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 AMPD1P23109 780 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 GKP32189 559 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 HCAR3P49019 387 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 CCNHP51946 323 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 NDST2P52849 883 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 ADKP55263 362 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 GEMIN4P57678 1058 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 RACK1P63244 317 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 SLC25A11Q02978 314 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 CYTH1Q15438 398 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 DPYSL2Q16555 572 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 SLC18A3Q16572 532 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 PARP15Q460N3 678 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 BOLA3Q53S33 107 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 INO80DQ53TQ3 878 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 AFMIDQ63HM1 303 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 LINC00114Q6XXX2 140 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 RFX8Q6ZV50 586 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 ERN2Q76MJ5 926 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 ARHGAP12Q8IWW6 846 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 NETO2Q8NC67 525 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 OR2AP1Q8NGE2 309 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 GRIN3AQ8TCU5 1115 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 SLC6A18Q96N87 628 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 NCAPGQ9BPX3 1015 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 HDAC8Q9BY41 377 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 TM6SF2Q9BZW4 377 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 SLC39A8Q9C0K1 460 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 RUBCNLQ9H714 662 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 PDFQ9HBH1 243 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 CWC15Q9P013 229 aaKnown RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 HECAQ9UBI9 543 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-212ENST00000528930 IP6K2Q9UHH9 426 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 ANAPC7Q9UJX3 599 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 HPCAL4Q9UM19 191 aa8.55□□□□□ -1.04
SSBP3-212ENST00000528930 J3KR12 359 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 HNRNPRO43390 633 aaKnown RBP8.54□□□□□ -1.04
SSBP3-212ENST00000528930 TMCC1O94876 653 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 ITGA2BP08514 1039 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 H2AFZP0C0S5 128 aa8.54□□□□□ -1.04
SSBP3-212ENST00000528930 IL4RP24394 825 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms