RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 HACD3Q9P035 362 aa12.17□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MTRF1LQ9UGC7 380 aaKnown RBP12.17□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CYP8B1Q9UNU6 501 aa12.17□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TEX264Q9Y6I9 313 aa12.17□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CCDC78A2IDD5 438 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MROH6A6NGR9 719 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SLC7A4O43246 635 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SLC4A1P02730 911 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ADRA1DP25100 572 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HOXA6P31267 233 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ELK3P41970 407 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 LIG3P49916 1009 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PTSQ03393 145 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SFSWAPQ12872 951 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TAF1AQ15573 450 aaPredicted RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MAP7D1Q3KQU3 841 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PCID2Q5JVF3 399 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 LIPIQ6XZB0 460 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GLT6D1Q7Z4J2 308 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TMC3Q7Z5M5 1100 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ANKMY2Q8IV38 441 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CFAP54Q96N23 3096 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SRPK1Q96SB4 655 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GPR63Q9BZJ6 419 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TRABDQ9H4I3 376 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 VIPAS39Q9H9C1 493 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ZFYVE1Q9HBF4 777 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CHMP2BQ9UQN3 213 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HCN4Q9Y3Q4 1203 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TCAF1Q9Y4C2 921 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MAD1L1Q9Y6D9 718 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NUMA1Q14980 2115 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HEATR9A2RTY3 570 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GOLGA8CPA6NN73 597 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NEMP1O14524 444 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 AXIN1O15169 862 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 EIF3HO15372 352 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TSPAN6O43657 245 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MMP20O60882 483 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SASH3O75995 380 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CRTAMO95727 393 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 C1SP09871 688 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 GM2AP17900 193 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NFKBIAP25963 317 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 STC1P52823 247 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NUBP1P53384 320 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ARHGEF7Q14155 803 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CASC4Q6P4E1 433 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 RFLNAQ6ZTI6 216 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HSD11B1LQ7Z5J1 315 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ZBED8Q8IZ13 594 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FBXO36Q8NEA4 188 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PPHLN1Q8NEY8 458 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 LRRC39Q96DD0 335 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 STAMBPL1Q96FJ0 436 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PHOX2BQ99453 314 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 EBNA1BP2Q99848 306 aaKnown RBP12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 KIFC1Q9BW19 673 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PHACTR1Q9C0D0 580 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PLAC1Q9HBJ0 212 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 IL17CQ9P0M4 197 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SLC2A6Q9UGQ3 507 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SOX13Q9UN79 622 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 INVSQ9Y283 1065 aa12.16□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FANCMQ8IYD8 2048 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 EML5Q05BV3 1969 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 IGHV1OR15-9A0A0B4J2B8 117 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PRR23AA6NEV1 266 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FAM47DPA6NHR8 397 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 C2orf81A6NN90 581 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ZNF217O75362 1048 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 PCDH8O95206 1070 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ELFN1P0C7U0 828 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SP9P0CG40 484 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ZNF30P17039 623 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 LPOP22079 712 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 NMBRP28336 390 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 HMGCLP35914 325 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MAGEA4P43358 317 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FNTBP49356 437 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 ZNF140P52738 457 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TSTD2Q5T7W7 516 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SEL1L3Q68CR1 1132 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MICALCLQ6ZW33 695 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 OR4K2Q8NGD2 314 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 OR13C4Q8NGS5 318 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 MFSD3Q96ES6 412 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 TOE1Q96GM8 510 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 DNAJC1Q96KC8 554 aaKnown RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 C9orf72Q96LT7 481 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 FCRL3Q96P31 734 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 BTBD1Q9H0C5 482 aa12.15□□□□□ -0.46
TRAF3IP2-211ENST00000528599 SGK2Q9HBY8 427 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms