RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ARL13AQ5H913 290 aaPredicted RBP14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 ARMC12Q5T9G4 340 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 SEL1L3Q68CR1 1132 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 ACAD11Q709F0 780 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 STK40Q8N2I9 435 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 ZNF781Q8N8C0 355 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 MAB21L3Q8N8X9 362 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 LPCAT1Q8NF37 534 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 OR13C4Q8NGS5 318 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 RHEBL1Q8TAI7 183 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 OLFM1Q99784 485 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 EBF4Q9BQW3 602 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 AARSD1Q9BTE6 412 aaKnown RBP14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 ABCB8Q9NUT2 735 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 TAS2R13Q9NYV9 303 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 CFAP97Q9P2B7 532 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 NUMBLQ9Y6R0 609 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 PTPRSQ13332 1948 aa14.78□□□□□ -0.04
ECHDC1-220ENST00000528402 C2orf71A6NGG8 1288 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 AURKAO14965 403 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 STX7O15400 261 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 SNAP91O60641 907 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 MAGEC1O60732 1142 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 SOCS5O75159 536 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 SMIM24O75264 130 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 GJB3O75712 270 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 PIGNO95427 931 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 F7P08709 466 aaPredicted RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 SPATA31D3P0C874 917 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TPBGLP0DKB5 382 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 PTPN2P17706 415 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 HOXA9P31269 272 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 EPHA5P54756 1037 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 ALDH18A1P54886 795 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 ADARP55265 1226 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 ATP6V0D1P61421 351 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 NFKB2Q00653 900 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 ARHGAP15Q53QZ3 475 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 CERS6Q6ZMG9 384 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 SPATA31D4Q6ZUB0 917 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TEX9Q8N6V9 391 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 MRPL43Q8N983 215 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 MDGA1Q8NFP4 955 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 OR4K2Q8NGD2 314 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 UTP4Q969X6 686 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 MCUR1Q96AQ8 359 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 NDNQ99608 321 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TTC1Q99614 292 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TFB2MQ9H5Q4 396 aaKnown RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TAS2R1Q9NYW7 299 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 MARCH4Q9P2E8 410 aaPredicted RBP14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 DPP7Q9UHL4 492 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 TMCO1Q9UM00 188 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 PCDHGC4Q9Y5F7 938 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 SPO11Q9Y5K1 396 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 ACTL7AQ9Y615 435 aa14.77□□□□□ -0.04
ECHDC1-220ENST00000528402 PCNTO95613 3336 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 A0A1W2PQ67 120 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 B2RBV5 119 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 LEFTY2O00292 366 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 DIAPH2O60879 1101 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 IMPDH1P20839 514 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 ARRB2P32121 409 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 GMPRP36959 345 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 EPHB1P54762 984 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 PTPN5P54829 565 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 CYP4F8P98187 520 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 TRAF2Q12933 501 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 ZNF460Q14592 562 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 ZRSR2Q15696 482 aaKnown RBP14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 UGT3A1Q6NUS8 523 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 TRIM67Q6ZTA4 783 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 RAB44Q7Z6P3 723 aaPredicted RBP14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 TTC7BQ86TV6 843 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 HS6ST3Q8IZP7 471 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 NKAPQ8N5F7 415 aaKnown RBP14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 ISG20Q96AZ6 181 aaKnown RBP14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 TCF25Q9BQ70 676 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 SUDS3Q9H7L9 328 aaPredicted RBP14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 PKP3Q9Y446 797 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 CENPFP49454 3210 aa14.76□□□□□ -0.05
ECHDC1-220ENST00000528402 OR51F1A6NGY5 319 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PGLSO95336 258 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 IGSF6O95976 241 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ENO1P06733 434 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PDHA1P08559 390 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 HNRNPA1P09651 372 aaKnown RBP eCLIP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 EZRP15311 586 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PTGER3P43115 390 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 NUMBP49757 651 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 CDKN2DP55273 166 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 ZXDBP98169 803 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SATB1Q01826 763 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 BCL2L1Q07817 233 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 PDAP1Q13442 181 aaKnown RBP14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 DMC1Q14565 340 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 SH2D4BQ5SQS7 431 aa14.75□□□□□ -0.05
ECHDC1-220ENST00000528402 LYPLAL1Q5VWZ2 237 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms