RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 LMNTD2Q8IXW0 634 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 ELMOD1Q8N336 334 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 RBM15BQ8NDT2 890 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 OR6K2Q8NGY2 324 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 WDR60Q8WVS4 1066 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 ALG14Q96F25 216 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 MRPL57Q9BQC6 102 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 TMEM106CQ9BVX2 250 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 TM6SF2Q9BZW4 377 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 STN1Q9H668 368 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 SORCS3Q9UPU3 1222 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 TRAV19A0A0A6YYK7 116 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 MAGEC1O60732 1142 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 PMLP29590 882 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 TAF11Q15544 211 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 FAM83EQ2M2I3 478 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 ARL13AQ5H913 290 aaPredicted RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 ZNF549Q6P9A3 640 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 TMEM207Q6UWW9 146 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 FAM217AQ8IXS0 508 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 CCNYL1Q8N7R7 359 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 FBXO27Q8NI29 283 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 SLC46A2Q9BY10 475 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 CDH19Q9H159 772 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 NLE1Q9NVX2 485 aaPredicted RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 STK39Q9UEW8 545 aa17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 APOBEC2Q9Y235 224 aaKnown RBP17.31■□□□□ 0.36
PCDHA6-202ENST00000527624 OBSL1O75147 1896 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 PRR5-ARHGAP8B1AHC4 643 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 GLUD1P00367 558 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 LTA4HP09960 611 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 HSPA8P11142 646 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 CES1P23141 567 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 CCR2P41597 374 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 RAP1GDS1P52306 607 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 SLC7A9P82251 487 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 ARHGAP8P85298 464 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 KDSRQ06136 332 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 NSUN2Q08J23 767 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 TAF1AQ15573 450 aaPredicted RBP17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 CFAP157Q5JU67 520 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 GPR158Q5T848 1215 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 NCEH1Q6PIU2 408 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 HTR3DQ70Z44 454 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 DCAF4L2Q8NA75 395 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 TXNDC5Q8NBS9 432 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 GPR150Q8NGU9 434 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 NAF1Q96HR8 494 aaKnown RBP17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 GCNAQ96QF7 691 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 ADGRE3Q9BY15 652 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 DRC3Q9H069 523 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 COG4Q9H9E3 785 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 ASAH2Q9NR71 780 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 DNAJC28Q9NX36 388 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
PCDHA6-202ENST00000527624 C2orf81A6NN90 581 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 ANKRD66B4E2M5 251 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 PIGNO95427 931 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 BMP1P13497 986 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 ALOX15P16050 662 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 AOC1P19801 751 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 CTNNB1P35222 781 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 LBX1P52954 281 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 PPIGQ13427 754 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 INO80DQ53TQ3 878 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 AGAP9Q5VTM2 703 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 ILKAPQ9H0C8 392 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 CYP4F12Q9HCS2 524 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 BPIFA1Q9NP55 256 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 MAN1C1Q9NR34 630 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 BATF3Q9NR55 127 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 POLR3BQ9NW08 1133 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 STOML1Q9UBI4 398 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 LEFTY2O00292 366 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 SMAD6O43541 496 aaKnown RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 RFPL2O75678 378 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 CDC25CP30307 473 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 KPNA2P52292 529 aaKnown RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 STC1P52823 247 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 FPGSQ05932 587 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 TECRLQ5HYJ1 363 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 SDCCAG8Q86SQ7 713 aaPredicted RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 DNAJC5GQ8N7S2 189 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 MAPK15Q8TD08 544 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 SCG3Q8WXD2 468 aaKnown RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 PPP1R36Q96LQ0 422 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 EMILIN2Q9BXX0 1053 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 POMKQ9H5K3 350 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 PRKAG2Q9UGJ0 569 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 RIMKLBQ9ULI2 386 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 PLA2G4CQ9UP65 541 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 CCL26Q9Y258 94 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 PCDHB9Q9Y5E1 797 aa17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.29■□□□□ 0.36
PCDHA6-202ENST00000527624 UBA6A0AVT1 1052 aaPredicted RBP17.28■□□□□ 0.36
PCDHA6-202ENST00000527624 KRT36O76013 467 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms