RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 TMX2-CTNND1H3BSU7 103 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 PPM1DO15297 605 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-201ENST00000526271 SOD1P00441 154 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 XPAP23025 273 aaPredicted RBP14.29□□□□□ -0.12
CPSF1-201ENST00000526271 NSFP46459 744 aaKnown RBP14.29□□□□□ -0.12
CPSF1-201ENST00000526271 POLD2P49005 469 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 SLC10A7Q0GE19 358 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 SYCP1Q15431 976 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 MANEAQ5SRI9 462 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 NKAIN2Q5VXU1 208 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 PNCKQ6P2M8 343 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 HSD11B1LQ7Z5J1 315 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 MCOLN2Q8IZK6 566 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 OR6C4Q8NGE1 309 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 ENOX1Q8TC92 643 aaKnown RBP14.29□□□□□ -0.12
CPSF1-201ENST00000526271 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 CNPY3Q9BT09 278 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
CPSF1-201ENST00000526271 TEX101Q9BY14 249 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 SPRY4Q9C004 299 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 DPEP2Q9H4A9 486 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 CATSPERBQ9H7T0 1116 aa14.29□□□□□ -0.12
CPSF1-201ENST00000526271 FGF10O15520 208 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-201ENST00000526271 HTRA2O43464 458 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-201ENST00000526271 ECEL1O95672 775 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 EML2O95834 649 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 CALB1P05937 261 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 CCNB1P14635 433 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 TCF4P15884 667 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 ERCC2P18074 760 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 MPSTP25325 297 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 STAT1P42224 750 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 NDST2P52849 883 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 TPI1P60174 286 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 AMZ1Q400G9 498 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 PHF19Q5T6S3 580 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 TSPAN33Q86UF1 283 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 CCDC74BQ96LY2 380 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 AGPAT1Q99943 283 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 FAM117AQ9C073 453 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 SUDS3Q9H7L9 328 aaPredicted RBP14.28□□□□□ -0.12
CPSF1-201ENST00000526271 ETNK2Q9NVF9 386 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 GEMIN8Q9NWZ8 242 aaKnown RBP14.28□□□□□ -0.12
CPSF1-201ENST00000526271 OCIAD1Q9NX40 245 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 TAAR2Q9P1P5 351 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 B3GALT1Q9Y5Z6 326 aa14.28□□□□□ -0.12
CPSF1-201ENST00000526271 CACNB4O00305 520 aaPredicted RBP14.27□□□□□ -0.13
CPSF1-201ENST00000526271 TEX33O43247 280 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 PALMO75781 387 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 HEXIM1O94992 359 aaKnown RBP14.27□□□□□ -0.13
CPSF1-201ENST00000526271 CPNE6O95741 557 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 ELFN1P0C7U0 828 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 MYCLP1P12525 358 aaPredicted RBP14.27□□□□□ -0.13
CPSF1-201ENST00000526271 TRAF2Q12933 501 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 MAMLD1Q13495 774 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 DPYSQ14117 519 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 E4F1Q66K89 784 aaPredicted RBP14.27□□□□□ -0.13
CPSF1-201ENST00000526271 SASS6Q6UVJ0 657 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 IRF2BP2Q7Z5L9 587 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 HEATR4Q86WZ0 1026 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 BMPERQ8N8U9 685 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 ZDHHC1Q8WTX9 485 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 CMKLR1Q99788 373 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 WDR26Q9H7D7 661 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 ATP13A3Q9H7F0 1226 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 CARS2Q9HA77 564 aaKnown RBP14.27□□□□□ -0.13
CPSF1-201ENST00000526271 FANCLQ9NW38 375 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 PCDHGC4Q9Y5F7 938 aa14.27□□□□□ -0.13
CPSF1-201ENST00000526271 IGHV1OR21-1A0A087WYE8 117 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CLEC18AA5D8T8 446 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 NPIPB15A6NHN6 443 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 EEF2KO00418 725 aaKnown RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 THRAP10827 490 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 LIFP15018 202 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 SERPINA4P29622 427 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 UGT1A3P35503 534 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 ETV3P41162 512 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 SCNN1BP51168 640 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 LIMK2P53671 638 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 AIF1P55008 147 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CDK3Q00526 305 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CTBSQ01459 385 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 TLE1Q04724 770 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 NSUN2Q08J23 767 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 GRM3Q14832 879 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 ACOX1Q15067 660 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 SKIDA1Q1XH10 827 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 MAP9Q49MG5 647 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CT47A1Q5JQC4 288 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 PLEKHA7Q6IQ23 1121 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 XKR5Q6UX68 686 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CLEC18BQ6UXF7 455 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms