RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 A0A0U1RQF3 1178 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ABHD14A-ACY1A0A1B0GW23 586 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 GOLGA8IPA6NC78 632 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 GOLGA8JA6NMD2 632 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 TARM1B6A8C7 271 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 TISP43B9A030 160 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 MAPK13O15264 365 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 CD3EAPO15446 510 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 AKAP3O75969 853 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 VNN1O95497 513 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 FGBP02675 491 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ANXA2P07355 339 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 CLTAP09496 248 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 STAG3L1P0CL83 205 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 EPB41P11171 864 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 ACTN1P12814 892 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 KRT13P13646 458 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 CSF2RAP15509 400 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ITGB8P26012 769 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 UQCRC1P31930 480 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ACOT2P49753 483 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ITGA8P53708 1063 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 OSTNP61366 133 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 MRPS21P82921 87 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 HTRA4P83105 476 aaPredicted RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 POU5F1Q01860 360 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.653e-6■□□□□ 9.8
USP48-211ENST00000526044 DAG1Q14118 895 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 DCAF4L1Q3SXM0 396 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 CCDC40Q4G0X9 1142 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ZCWPW2Q504Y3 356 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 FCRLBQ6BAA4 426 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 PLAG1Q6DJT9 500 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 CRELD2Q6UXH1 353 aaPredicted RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 GET4Q7L5D6 327 aaPredicted RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 LUZP1Q86V48 1076 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 DHX40Q8IX18 779 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 FAM186BQ8IYM0 893 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ANKRD20A12PQ8NF67 263 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 PJA1Q8NG27 643 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 SAAL1Q96ER3 474 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 CCDC94Q9BW85 323 aaPredicted RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 EIF2AQ9BY44 585 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 CDT1Q9H211 546 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 THAP9Q9H5L6 903 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 PDZD7Q9H5P4 517 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 RPF1Q9H9Y2 349 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 UBN1Q9NPG3 1134 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 SAMSN1Q9NSI8 373 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 CAPN11Q9UMQ6 739 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 DRG1Q9Y295 367 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 NFE2L3Q9Y4A8 694 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 PCDHB7Q9Y5E2 793 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ALPK3Q96L96 1907 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 ZMYM2Q9UBW7 1377 aa4.73□□□□□ -1.65
USP48-211ENST00000526044 KIAA0100Q14667 2235 aaKnown RBP4.73□□□□□ -1.65
USP48-211ENST00000526044 HTTP42858 3142 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 LACTBL1A8MY62 500 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 KCNJ18B7U540 433 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 MASP2O00187 686 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 THAP12O43422 761 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 SERPINC1P01008 464 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 TPM2P07951 284 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 TNNI1P19237 187 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 FBLP22087 321 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 EEF1GP26641 437 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 SERPINB3P29508 390 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 TNFSF9P41273 254 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 MTIF2P46199 727 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 CASP4P49662 377 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 GATMP50440 423 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 SPAG1Q07617 926 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 CYP24A1Q07973 514 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 KCNJ12Q14500 433 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 SNRNP35Q16560 246 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 FILIP1LQ4L180 1135 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 HSP90AA4PQ58FG1 418 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 TCP11X2Q5H9J9 407 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 ZNF788Q6ZQV5 615 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 INTS8Q75QN2 995 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 MRPL10Q7Z7H8 261 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 ECHDC2Q86YB7 292 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 CBWD2Q8IUF1 395 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 CD302Q8IX05 232 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 ZC3H3Q8IXZ2 948 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 SIRT6Q8N6T7 355 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 ATP11CQ8NB49 1132 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 NTN5Q8WTR8 489 aaPredicted RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 CCDC127Q96BQ5 260 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 IQCDQ96DY2 449 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 FNBP1Q96RU3 617 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 TSPAN18Q96SJ8 248 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 APOL6Q9BWW8 343 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 VN1R3Q9BXE9 311 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 VPS16Q9H269 839 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 ELAC1Q9H777 363 aaKnown RBP4.72□□□□□ -1.65
USP48-211ENST00000526044 PLEKHA5Q9HAU0 1116 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 TBC1D23Q9NUY8 699 aa4.72□□□□□ -1.65
USP48-211ENST00000526044 RBAKQ9NYW8 714 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms