RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 DCAF12L2Q5VW00 463 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 DAB2IPQ5VWQ8 1189 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TBC1D9BQ66K14 1250 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ATG9BQ674R7 924 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 FAM83HQ6ZRV2 1179 aaPredicted RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 R3HCC1LQ7Z5L2 792 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 CPLX4Q7Z7G2 160 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TBC1D26Q86UD7 250 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TRIM74Q86UV6 250 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TRIM73Q86UV7 250 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 C7orf57Q8NEG2 295 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ZMIZ2Q8NF64 920 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 KLHL29Q96CT2 875 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 MSI2Q96DH6 328 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 KLHL15Q96M94 604 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 WDR77Q9BQA1 342 aaPredicted RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 FAM234AQ9H0X4 552 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 RBM38Q9H0Z9 239 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 CDT1Q9H211 546 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 SPATS2LQ9NUQ6 558 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 HIF1ANQ9NWT6 349 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 KIAA1456Q9P272 454 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ZNF580Q9UK33 172 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 SRPRBQ9Y5M8 271 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 ITGB4P16144 1822 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 VIRMAQ69YN4 1812 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 MRC1P22897 1456 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 LY75O60449 1722 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 EIF3CLB5ME19 914 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 MS4A18H0YCH9 400 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 ITM2AO43736 263 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 LIASO43766 372 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 RTN3O95197 1032 aaPredicted RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 ALPLP05186 524 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 SPARCP09486 303 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 HMOX1P09601 288 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 HSPA1AP0DMV8 641 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 HSPA1BP0DMV9 641 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 PTPN2P17706 415 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 TNFAIP3P21580 790 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 POLD2P49005 469 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 HARS2P49590 506 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 HIST2H2ACQ16777 129 aaPredicted RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 SLC9B1Q4ZJI4 515 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 RUSC1-AS1Q66K80 236 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 TMEM71Q6P5X7 295 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 C17orf99Q6UX52 265 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 MON1BQ7L1V2 547 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 GSTA5Q7RTV2 222 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 DEFB132Q7Z7B7 95 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 CADM3Q8N126 398 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 CNTROBQ8N137 903 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 ZCCHC9Q8N567 271 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 PLD5Q8N7P1 536 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 MIGA1Q8NAN2 632 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 KDM1BQ8NB78 822 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 OR4N2Q8NGD1 307 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 NFKBIDQ8NI38 313 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 BICD2Q8TD16 824 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 HDAC2Q92769 488 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 SMARCE1Q969G3 411 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 MARK4Q96L34 752 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 CFAP53Q96M91 514 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 YME1L1Q96TA2 773 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 SF3B5Q9BWJ5 86 aaKnown RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 HEMGNQ9BXL5 484 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 PRKRIP1Q9H875 184 aaPredicted RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 TAS2R10Q9NYW0 307 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 MPP6Q9NZW5 540 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 SLC25A10Q9UBX3 287 aaPredicted RBP4.03□□□□□ -1.76
CD44-219ENST00000525685 SARDHQ9UL12 918 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 CARD8Q9Y2G2 431 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 FAM96BQ9Y3D0 163 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 PAM16Q9Y3D7 125 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 SCN11AQ9UI33 1791 aa4.03□□□□□ -1.76
CD44-219ENST00000525685 SIPA1L3O60292 1781 aaPredicted RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 LRRC53A6NM62 1247 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 CHL1O00533 1208 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 F9P00740 461 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 ARSBP15848 533 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 CTPS1P17812 591 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 PRKAR2BP31323 418 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 ABCD1P33897 745 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 THBS3P49746 956 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 GNAQP50148 359 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 CCR9P51686 369 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 RARSP54136 660 aaKnown RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 EIF3BP55884 814 aaKnown RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 P2RX3P56373 397 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 NANOS2P60321 138 aaKnown RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 ZP1P60852 638 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 SLC18A2Q05940 514 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 PLEKHO1Q53GL0 409 aaPredicted RBP4.02□□□□□ -1.77
CD44-219ENST00000525685 KLHL22Q53GT1 634 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 FSCBQ5H9T9 825 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 PRAMEF19Q5SWL8 479 aa4.02□□□□□ -1.77
CD44-219ENST00000525685 ZNF530Q6P9A1 599 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms