RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CCNB1P14635 433 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 ERCC2P18074 760 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 ALDH4A1P30038 563 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 NSUN2Q08J23 767 aaKnown RBP eCLIP23.98■■□□□ 1.43
USP47-205ENST00000525257 NRROSQ86YC3 692 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 RCBTB1Q8NDN9 531 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 GPBAR1Q8TDU6 330 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 ZDHHC1Q8WTX9 485 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 COQ10AQ96MF6 247 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 NUDT22Q9BRQ3 303 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 TAS2R14Q9NYV8 317 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 CHMP5Q9NZZ3 219 aa23.98■■□□□ 1.43
USP47-205ENST00000525257 AKAP7Q9P0M2 348 aaPredicted RBP23.98■■□□□ 1.43
USP47-205ENST00000525257 RHPN2P1A8MT19 583 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 LGALS16A8MUM7 142 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 ATMINO43313 823 aaPredicted RBP23.97■■□□□ 1.43
USP47-205ENST00000525257 CD82P27701 267 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 AP1S1P61966 158 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 UBXN1Q04323 297 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 IL10RBQ08334 325 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 RFTN1Q14699 578 aaPredicted RBP23.97■■□□□ 1.43
USP47-205ENST00000525257 SDK2Q58EX2 2172 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 PPP6R3Q5H9R7 873 aaPredicted RBP23.97■■□□□ 1.43
USP47-205ENST00000525257 ERMARDQ5T6L9 678 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 TMEM164Q5U3C3 297 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 DENND2CQ68D51 928 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 HEATR4Q86WZ0 1026 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 HTR3CQ8WXA8 447 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 GSDMCQ9BYG8 508 aa23.97■■□□□ 1.43
USP47-205ENST00000525257 PHPT1Q9NRX4 125 aaPredicted RBP23.97■■□□□ 1.43
USP47-205ENST00000525257 PTPN13Q12923 2485 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 TMCO5BA8MYB1 307 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 EIF3CLB5ME19 914 aaKnown RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 TERTO14746 1132 aaKnown RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 FGF1P05230 155 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 AK4P27144 223 aaPredicted RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 GNPDA1P46926 289 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 ILF3Q12906 894 aaKnown RBP eCLIP23.96■■□□□ 1.43
USP47-205ENST00000525257 MAMLD1Q13495 774 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 CNGA3Q16281 694 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 ZNF574Q6ZN55 896 aaPredicted RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 ATG14Q6ZNE5 492 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 ZNF438Q7Z4V0 828 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 C17orf82Q86X59 251 aaPredicted RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 TP53INP2Q8IXH6 220 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 ARFGAP1Q8N6T3 406 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 PDCD6IPQ8WUM4 868 aaKnown RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 PATE1Q8WXA2 126 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 PSKH2Q96QS6 385 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 EIF3CQ99613 913 aaKnown RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 TAAR2Q9P1P5 351 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 SEPT3Q9UH03 358 aa23.96■■□□□ 1.43
USP47-205ENST00000525257 LIMA1Q9UHB6 759 aaKnown RBP23.96■■□□□ 1.43
USP47-205ENST00000525257 ECEL1O95672 775 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 FUCA1P04066 466 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 CEACAM5P06731 702 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 SFTPCP11686 197 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 RENBPP51606 427 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 SLC10A7Q0GE19 358 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 BIRC2Q13490 618 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 LBRQ14739 615 aaKnown RBP23.95■■□□□ 1.42
USP47-205ENST00000525257 SLC30A9Q6PML9 568 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 ANKRD20A12PQ8NF67 263 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 PTCD2Q8WV60 388 aaKnown RBP23.95■■□□□ 1.42
USP47-205ENST00000525257 CCDC74BQ96LY2 380 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 PARVAQ9NVD7 372 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 PCDHGC4Q9Y5F7 938 aa23.95■■□□□ 1.42
USP47-205ENST00000525257 IGHV5-10-1A0A0J9YXX1 117 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.94■■□□□ 1.42
USP47-205ENST00000525257 GOLGA6CA6NDK9 693 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 GOLGA6BA6NDN3 693 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.94■■□□□ 1.42
USP47-205ENST00000525257 STMND1H3BQB6 276 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 GOLGA6DP0CG33 693 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 FERP16591 822 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 VIPR1P32241 457 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 ZNF235Q14590 738 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 TMCO4Q5TGY1 634 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 PMEPA1Q969W9 287 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 SEMA3CQ99985 751 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 FUCA2Q9BTY2 467 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 TEX101Q9BY14 249 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 FRMD8Q9BZ67 464 aaPredicted RBP23.94■■□□□ 1.42
USP47-205ENST00000525257 B3GNT4Q9C0J1 378 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 TRNAU1APQ9NX07 287 aaKnown RBP23.94■■□□□ 1.42
USP47-205ENST00000525257 GOLGA6AQ9NYA3 693 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 SUFUQ9UMX1 484 aa23.94■■□□□ 1.42
USP47-205ENST00000525257 HGSO14964 777 aaPredicted RBP23.93■■□□□ 1.42
USP47-205ENST00000525257 SUV39H1O43463 412 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 PRPSAP2O60256 369 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 HEXIM1O94992 359 aaKnown RBP23.93■■□□□ 1.42
USP47-205ENST00000525257 CPP00450 1065 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 CD1CP29017 333 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 ETV3P41162 512 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 NR1D2Q14995 579 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 CLCA4Q14CN2 919 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 CYP4V2Q6ZWL3 525 aaPredicted RBP23.93■■□□□ 1.42
USP47-205ENST00000525257 HSD11B1LQ7Z5J1 315 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 DTD2Q96FN9 168 aa23.93■■□□□ 1.42
USP47-205ENST00000525257 ERGIC2Q96RQ1 377 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms