RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 U3KQA8 63 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 A0A0J9YYE9 177 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 CPED1A4D0V7 1026 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 CACNB4O00305 520 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 YY2O15391 372 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZRANB2O95218 330 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 RASGRP1O95267 797 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 IPO7O95373 1038 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 PRLP01236 227 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 TRBC1P01850 177 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 ANXA6P08133 673 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 MMP2P08253 660 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 CKMT1AP12532 417 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 PECAM1P16284 738 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 NFKBIAP25963 317 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 HK3P52790 923 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 TFDP2Q14188 446 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 TAZQ16635 292 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 CDKN3Q16667 212 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 HES3Q5TGS1 186 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 LRRC66Q68CR7 880 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 C11orf63Q6NUN7 778 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 ESRP1Q6NXG1 681 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZCCHC8Q6NZY4 707 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 TMPRSS12Q86WS5 348 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 KATNAL2Q8IYT4 538 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 RCOR2Q8IZ40 523 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 NDUFAF2Q8N183 169 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 CBARPQ8N350 705 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 KDF1Q8NAX2 398 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 OR1E3Q8WZA6 343 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 DTD2Q96FN9 168 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 PDXPQ96GD0 296 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 OLFM3Q96PB7 478 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 MCCC1Q96RQ3 725 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 RBM15Q96T37 977 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 HEMGNQ9BXL5 484 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 SUDS3Q9H7L9 328 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 FGF22Q9HCT0 170 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 ACACBO00763 2458 aa12.85□□□□□ -0.35
TRAPPC4-205ENST00000525079 hCG_1818297A0A087WSY0 165 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 A0A0U1RQJ8 604 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TRABD2BA6NFA1 517 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 KRT37O76014 449 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TNFP01375 233 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TRIM23P36406 574 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 BLKP51451 505 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 KIAA1024LP59773 190 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 INSM1Q01101 510 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 PTSQ03393 145 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TARDBPQ13148 414 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 ILKQ13418 452 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TFDP3Q5H9I0 405 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 GUSBP11Q6P575 273 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TECPR1Q7Z6L1 1165 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 KIAA1328Q86T90 577 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZC3H18Q86VM9 953 aaKnown RBP12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 TMEM139Q8IV31 216 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 FAM181AQ8N9Y4 354 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 OR56A4Q8NGH8 313 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 ATL2Q8NHH9 583 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 MDM1Q8TC05 714 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 IFI44Q8TCB0 444 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 DESI2Q9BSY9 194 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 WDR26Q9H7D7 661 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 SIRPGQ9P1W8 387 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 GULP1Q9UBP9 304 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 LRP4O75096 1905 aa12.84□□□□□ -0.35
TRAPPC4-205ENST00000525079 FRYQ5TBA9 3013 aa12.83□□□□□ -0.35
TRAPPC4-205ENST00000525079 MAP1BP46821 2468 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 LMO7DNF2Z398 122 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 PSMD11O00231 422 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TPP1O14773 563 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 CLDN7O95471 211 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 CDK4P11802 303 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 TGM2P21980 687 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 CA4P22748 312 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 PTPN3P26045 913 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 CDC25BP30305 580 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 DUSP3P51452 185 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 VAV2P52735 878 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 E2F1Q01094 437 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 CAMK2BQ13554 666 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 GALNT3Q14435 633 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 ELOCQ15369 112 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 NR0B2Q15466 257 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 PCSK7Q16549 785 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 QPCTQ16769 361 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 RAET1GQ6H3X3 334 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 EFL1Q7Z2Z2 1120 aaKnown RBP12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 NT5DC3Q86UY8 548 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 HEATR4Q86WZ0 1026 aa12.83□□□□□ -0.36
TRAPPC4-205ENST00000525079 SLC35F3Q8IY50 421 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms