RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 MYLK3Q32MK0 819 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 GRAMD1BQ3KR37 738 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 NADK2Q4G0N4 442 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 PPP6R3Q5H9R7 873 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 FAM171A1Q5VUB5 890 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 FUT10Q6P4F1 479 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 LILRA6Q6PI73 481 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 B3GNT6Q6ZMB0 384 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 GPR65Q8IYL9 337 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 DSELQ8IZU8 1212 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 LSMEM2Q8N112 164 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 ZNF567Q8N184 647 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 PYROXD2Q8N2H3 581 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 LRRC52Q8N7C0 313 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 CNTD1Q8N815 330 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 C12orf29Q8N999 325 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 DDI1Q8WTU0 396 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 RNF139Q8WU17 664 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 SMG7Q92540 1137 aaKnown RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 NT5C3BQ969T7 300 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 CCDC124Q96CT7 223 aaKnown RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 P2RY11Q96G91 374 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 MAELQ96JY0 434 aaKnown RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 LENG8Q96PV6 779 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 GCNAQ96QF7 691 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 SERPINI1Q99574 410 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 GPR22Q99680 433 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 PAAF1Q9BRP4 392 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 TTPALQ9BTX7 342 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 B3GNT5Q9BYG0 378 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 DRC3Q9H069 523 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 IRF2BPLQ9H1B7 796 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 MFSD1Q9H3U5 465 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 SMOC2Q9H3U7 446 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 Q9H521 79 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 RUBCNLQ9H714 662 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 LRRC40Q9H9A6 602 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 KCNK12Q9HB15 430 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 MRM3Q9HC36 420 aaKnown RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 WDR6Q9NNW5 1121 aaKnown RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 TCF7L2Q9NQB0 619 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 OXSMQ9NWU1 459 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 FNIP2Q9P278 1114 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 SARDHQ9UL12 918 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 DYRK1BQ9Y463 629 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 RAD54BQ9Y620 910 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 GMEB1Q9Y692 573 aa7.87□□□□□ -1.15
SPIDR-223ENST00000524033 ZFHX2Q9C0A1 2572 aaPredicted RBP7.87□□□□□ -1.15
SPIDR-223ENST00000524033 NLRC5Q86WI3 1866 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 A0A096LPK6 155 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CASTOR2A6NHX0 329 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SLCO1B7G3V0H7 640 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 TRIM38O00635 465 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PTGESO14684 152 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 HDAC3O15379 428 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 NDUFB5O43674 189 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 RECQL4O94761 1208 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 TNFAIP8O95379 198 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 HSPA4LO95757 839 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 F11P03951 625 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 C2P06681 752 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 POLBP06746 335 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ERVK-10P10266 1014 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PCSK2P16519 638 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 RPL17P18621 184 aaKnown RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PTPN3P26045 913 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SERPINB6P35237 376 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PPARGP37231 505 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ARL4AP40617 200 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 HADHAP40939 763 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CLCN5P51795 746 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SESN2P58004 480 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 IRF9Q00978 393 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 MS4A2Q01362 244 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SEMA3BQ13214 749 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PDK1Q15118 436 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ADRM1Q16186 407 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LRRC36Q1X8D7 754 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LSM12Q3MHD2 195 aaKnown RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 DCAF4L1Q3SXM0 396 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LRRC23Q53EV4 343 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PPM1LQ5SGD2 360 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LIPMQ5VYY2 423 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 FSTL4Q6MZW2 842 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 KLHDC10Q6PID8 442 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PRSS55Q6UWB4 352 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LRRC69Q6ZNQ3 347 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 RBM44Q6ZP01 1051 aaKnown RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ACOT1Q86TX2 421 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ZNF295-AS1Q8N0V1 137 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CRYBG2Q8N1P7 616 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PELI3Q8N2H9 469 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ANKRD52Q8NB46 1076 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 KYQ8NBH2 561 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 HASPINQ8TF76 798 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 STYXQ8WUJ0 223 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LZICQ8WZA0 190 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ATOH1Q92858 354 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ZNF669Q96BR6 464 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 ZNF707Q96C28 371 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms