RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ERGIC1Q969X5 290 aa4□□□□□ -1.77
SKP1-212ENST00000523966 NSUN4Q96CB9 384 aaKnown RBP4□□□□□ -1.77
SKP1-212ENST00000523966 FAM120BQ96EK7 910 aaKnown RBP4□□□□□ -1.77
SKP1-212ENST00000523966 SAT2Q96F10 170 aaPredicted RBP4□□□□□ -1.77
SKP1-212ENST00000523966 PGAM5Q96HS1 289 aa4□□□□□ -1.77
SKP1-212ENST00000523966 SLC41A2Q96JW4 573 aa4□□□□□ -1.77
SKP1-212ENST00000523966 LRFN5Q96NI6 719 aa4□□□□□ -1.77
SKP1-212ENST00000523966 FCRL4Q96PJ5 515 aa4□□□□□ -1.77
SKP1-212ENST00000523966 KXD1Q9BQD3 176 aa4□□□□□ -1.77
SKP1-212ENST00000523966 PCGF1Q9BSM1 259 aa4□□□□□ -1.77
SKP1-212ENST00000523966 TKTL2Q9H0I9 626 aa4□□□□□ -1.77
SKP1-212ENST00000523966 HINT3Q9NQE9 182 aaKnown RBP4□□□□□ -1.77
SKP1-212ENST00000523966 ZBTB40Q9NUA8 1239 aa4□□□□□ -1.77
SKP1-212ENST00000523966 TTC7AQ9ULT0 858 aaPredicted RBP4□□□□□ -1.77
SKP1-212ENST00000523966 R3HDM2Q9Y2K5 976 aaKnown RBP4□□□□□ -1.77
SKP1-212ENST00000523966 INSL5Q9Y5Q6 135 aa4□□□□□ -1.77
SKP1-212ENST00000523966 ATXN2Q99700 1313 aaKnown RBP3.99□□□□□ -1.77
SKP1-212ENST00000523966 hCG_1807616A0A1W2PRN6 198 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 FRMD3A2A2Y4 597 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 B4DLN1 442 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 I6L893 689 aaPredicted RBP3.99□□□□□ -1.77
SKP1-212ENST00000523966 HCRTR2O43614 444 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 JRKO75564 520 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 SERPINI2O75830 405 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 BMP15O95972 392 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 CSH1P0DML2 217 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 CSH2P0DML3 217 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 C21orf33P30042 268 aaPredicted RBP3.99□□□□□ -1.77
SKP1-212ENST00000523966 STX2P32856 288 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 PIGAP37287 484 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 HADHAP40939 763 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 PRCPP42785 496 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 METAP2P50579 478 aaKnown RBP eCLIP3.99□□□□□ -1.77
SKP1-212ENST00000523966 PGGT1BP53609 377 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 PMS2P54278 862 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 DUSP28Q4G0W2 176 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 MFSD4BQ5TF39 518 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 ZNF425Q6IV72 752 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 IRF2BP2Q7Z5L9 587 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 ZNF575Q86XF7 245 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 HACE1Q8IYU2 909 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 OR14L1PQ8NHC6 308 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 RRNAD1Q96FB5 475 aaKnown RBP3.99□□□□□ -1.77
SKP1-212ENST00000523966 URB1-AS1Q96HZ7 61 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 TXNDC15Q96J42 360 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 ZNF778Q96MU6 729 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 SH3GL2Q99962 352 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 DCLK3Q9C098 648 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 CLK4Q9HAZ1 481 aaKnown RBP3.99□□□□□ -1.77
SKP1-212ENST00000523966 ABI3Q9P2A4 366 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 RNF7Q9UBF6 113 aa3.99□□□□□ -1.77
SKP1-212ENST00000523966 IGHV4-28A0A0C4DH34 117 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 A0A1B0GVT2 93 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 BTBD18B2RXH4 712 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 IFNL4K9M1U5 179 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 FIBPO43427 364 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 RGS14O43566 566 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 STARD3NLO95772 234 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 HIST1H2ABP04908 130 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 PRSS2P07478 247 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 ACTN1P12814 892 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 TNFRSF1BP20333 461 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 HIST1H2ADP20671 130 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 GCH1P30793 250 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 MRPL12P52815 198 aaKnown RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 NLRP5P59047 1200 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 ACSM2AQ08AH3 577 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 TRAF1Q13077 416 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 IKQ13123 557 aaPredicted RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 GPS2Q13227 327 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 CTTNQ14247 550 aaKnown RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 TOMM20Q15388 145 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 MMEL1Q495T6 779 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 CXorf66Q5JRM2 361 aaPredicted RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 EFHC1Q5JVL4 640 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 PLEKHS1Q5SXH7 462 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 ACSM2BQ68CK6 577 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 QSOX2Q6ZRP7 698 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 HIST3H2AQ7L7L0 130 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 CACNA2D4Q7Z3S7 1137 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 SZRD1Q7Z422 152 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 ZC3HC1Q86WB0 502 aaKnown RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 RNF168Q8IYW5 571 aaPredicted RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 SPATA6LQ8N4H0 392 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 NSMCE1Q8WV22 266 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 MTBPQ96DY7 904 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 FEM1CQ96JP0 617 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 NUDCD1Q96RS6 583 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 C1QTNF5Q9BXJ0 243 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 DDX4Q9NQI0 724 aaKnown RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 CWC15Q9P013 229 aaKnown RBP3.98□□□□□ -1.77
SKP1-212ENST00000523966 MYO6Q9UM54 1294 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 CDC14AQ9UNH5 594 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 TTLL3Q9Y4R7 772 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 RAI2Q9Y5P3 530 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 PTGDR2Q9Y5Y4 395 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 STON1Q9Y6Q2 735 aa3.98□□□□□ -1.77
SKP1-212ENST00000523966 ABCC9O60706 1549 aa3.97□□□□□ -1.77
SKP1-212ENST00000523966 A0A1W2PQF6 199 aa3.97□□□□□ -1.77
SKP1-212ENST00000523966 H3BQ06 376 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms