RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 SGCDQ92629 289 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 TMEM68Q96MH6 324 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 SF3B5Q9BWJ5 86 aaKnown RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 IFIH1Q9BYX4 1025 aaKnown RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 ESRP2Q9H6T0 727 aaKnown RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 SYNCQ9H7C4 482 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 HIF1ANQ9NWT6 349 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 NSMCE4AQ9NXX6 385 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 ERVK-11Q9UQG0 969 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 PTGDR2Q9Y5Y4 395 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 CEPT1Q9Y6K0 416 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 PRSS47A8MTI9 375 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 J3KR12 359 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 AP3D1O14617 1153 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 SCAMP1O15126 338 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 HCRTR2O43614 444 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 NDUFS3O75489 264 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 SLC25A12O75746 678 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 NKX2-2O95096 273 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 VNN2O95498 520 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 FTCDO95954 541 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 DDX5P17844 614 aaKnown RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 MAOAP21397 527 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 ARRB2P32121 409 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 HOXD13P35453 343 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 PPARGP37231 505 aaPredicted RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 PIGAP37287 484 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 RPL3P39023 403 aaKnown RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 PSMB10P40306 273 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 UBA7P41226 1012 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 AMTP48728 403 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 COMPP49747 757 aaPredicted RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 PRAMEP78395 509 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 SORDQ00796 357 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 CRYMQ14894 314 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 C2orf68Q2NKX9 166 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 MMEL1Q495T6 779 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 HIST2H2BCQ6DN03 193 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 HIST2H2BDQ6DRA6 164 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 C8orf82Q6P1X6 216 aaPredicted RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 CFAP161Q6P656 301 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 TMEM154Q6P9G4 183 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 C9orf47Q6ZRZ4 202 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 TTC39CQ8N584 583 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 C1orf74Q96LT6 269 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 LRFN5Q96NI6 719 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 SDF4Q9BRK5 362 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 MMTAG2Q9BU76 263 aaKnown RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 HIPK2Q9H2X6 1198 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 GHITMQ9H3K2 345 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 PDZD7Q9H5P4 517 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 SH2D4AQ9H788 454 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 KAT14Q9H8E8 782 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 RRP7BPQ9NSQ0 103 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 AGO1Q9UL18 857 aaKnown RBP3.89□□□□□ -1.79
PCM1-220ENST00000523896 MTMR6Q9Y217 621 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
PCM1-220ENST00000523896 FRMD3A2A2Y4 597 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 DYTNA2CJ06 578 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 A6NCN8 305 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 AGAP14A8MT82 685 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 MYO1GB0I1T2 1018 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 HSPA12AO43301 675 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 HNRNPCL1O60812 293 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 OR2C1O95371 312 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 CYC1P08574 325 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 RARGP13631 454 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 IL7RP16871 459 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 ALOX12P18054 663 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 BDNFP23560 247 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 HNRNPH1P31943 449 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 HADHAP40939 763 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 CDKN2AP42771 156 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 THBS3P49746 956 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 HTR6P50406 440 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 MXI1P50539 228 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 METAP2P50579 478 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCM1-220ENST00000523896 DSC1Q08554 894 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 AIMP2Q13155 320 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 PDE1CQ14123 709 aaPredicted RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 ADIPOQQ15848 244 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 TDRD12Q587J7 1177 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 EFHC1Q5JVL4 640 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 JADE1Q6IE81 842 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 METTL2BQ6P1Q9 378 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 ZNF549Q6P9A3 640 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 GLDNQ6ZMI3 551 aaPredicted RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 PQLC2Q6ZP29 291 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 SEPT14Q6ZU15 432 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 TICAM1Q8IUC6 712 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 NEXN-AS1Q8NBZ9 246 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 OIT3Q8WWZ8 545 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 NSUN4Q96CB9 384 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 METTL2AQ96IZ6 378 aaKnown RBP3.88□□□□□ -1.79
PCM1-220ENST00000523896 PPP1R13BQ96KQ4 1090 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 CMTM3Q96MX0 182 aa3.88□□□□□ -1.79
PCM1-220ENST00000523896 CAMK1GQ96NX5 476 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms