RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 CDC14CA4D256 554 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 RASA4BC9J798 803 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 RASA4O43374 803 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 CREB3O43889 395 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 DNAJB5O75953 348 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 STK17BO94768 372 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 GNA14O95837 355 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 FUCA1P04066 466 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 PLEKP08567 350 aaPredicted RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 FURINP09958 794 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 F8A1P23610 371 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 ADRA1BP35368 520 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 DLSTP36957 453 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 ACTR1BP42025 376 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 ACTR1AP61163 376 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 CTBSQ01459 385 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 TRA2AQ13595 282 aaKnown RBP eCLIP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 EXOC3L4Q17RC7 722 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 ACBD5Q5T8D3 534 aaPredicted RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 PNCKQ6P2M8 343 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 MARK2Q7KZI7 788 aaKnown RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 FAM114A1Q8IWE2 563 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 CCDC13Q8IYE1 715 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 NAGSQ8N159 534 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 CPT1CQ8TCG5 803 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 GPT2Q8TD30 523 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 FNIP1Q8TF40 1166 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 RXFP2Q8WXD0 754 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 NCSTNQ92542 709 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 ELMO2Q96JJ3 720 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 SLC38A3Q99624 504 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 NOL6Q9H6R4 1146 aaKnown RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 LUZP4Q9P127 313 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 UBA2Q9UBT2 640 aaPredicted RBP11.64□□□□□ -0.55
SDCBP-211ENST00000523441 KCNMB2Q9Y691 235 aa11.64□□□□□ -0.55
SDCBP-211ENST00000523441 TTC24A2A3L6 582 aaPredicted RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 ZSCAN5CA6NGD5 496 aaPredicted RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 J3KR12 359 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 PON1P27169 355 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 EPHB2P29323 1055 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 STAT1P42224 750 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 RGRP47804 291 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 RAB15P59190 212 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 MC1RQ01726 317 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 FOXM1Q08050 763 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 RALGDSQ12967 914 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 PAK1Q13153 545 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 NFATC2Q13469 925 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 EIF2S3LQ2VIR3 472 aaKnown RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 MANEALQ5VSG8 457 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 SCYL2Q6P3W7 929 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 TMEM71Q6P5X7 295 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 CEACAM20Q6UY09 585 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 LIPIQ6XZB0 460 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 ZNF438Q7Z4V0 828 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 PDCD6IPQ8WUM4 868 aaKnown RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 SNX21Q969T3 373 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 NUS1Q96E22 293 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 CELF6Q96J87 481 aaKnown RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 EFHD1Q9BUP0 239 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 HOOK1Q9UJC3 728 aaKnown RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 TLK1Q9UKI8 766 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 MFHAS1Q9Y4C4 1052 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 PCDHB3Q9Y5E6 796 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 ST14Q9Y5Y6 855 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 ANKRD17O75179 2603 aaKnown RBP11.63□□□□□ -0.55
SDCBP-211ENST00000523441 CELSR2Q9HCU4 2923 aa11.63□□□□□ -0.55
SDCBP-211ENST00000523441 B4E171 279 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 TNFRSF10CO14798 259 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 MAP3K6O95382 1288 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 PDGFAP04085 211 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 CEACAM5P06731 702 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 MYCLP1P12525 358 aaPredicted RBP11.62□□□□□ -0.55
SDCBP-211ENST00000523441 BMP6P22004 513 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 SERPINA4P29622 427 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 SDC4P31431 198 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 TSPAN7P41732 249 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 GPR3P46089 330 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 SUOXP51687 545 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 CCDC14Q49A88 953 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 BRAT1Q6PJG6 821 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 SRLQ86TD4 932 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 BMPERQ8N8U9 685 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 OR10G6Q8NH81 332 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 JOSD2Q8TAC2 188 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 FAM172AQ8WUF8 416 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 FAM81BQ96LP2 452 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 TEFMQ96QE5 360 aaKnown RBP11.62□□□□□ -0.55
SDCBP-211ENST00000523441 ATP13A3Q9H7F0 1226 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 PHPT1Q9NRX4 125 aaPredicted RBP11.62□□□□□ -0.55
SDCBP-211ENST00000523441 KCND3Q9UK17 655 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 TMEM59LQ9UK28 342 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 NEU3Q9UQ49 428 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 TMEM98Q9Y2Y6 226 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms