RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CBARPQ8N350 705 aaPredicted RBP16.24■□□□□ 0.19
CLN8-206ENST00000523237 ARL10Q8N8L6 244 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 CCNYQ8ND76 341 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.24■□□□□ 0.19
CLN8-206ENST00000523237 PIH1D2Q8WWB5 315 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 OR1E3Q8WZA6 343 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 DTD2Q96FN9 168 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 RBM15Q96T37 977 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLN8-206ENST00000523237 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 FGF22Q9HCT0 170 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 DTLQ9NZJ0 730 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 GULP1Q9UBP9 304 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 PCDHB1Q9Y5F3 818 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 COL27A1Q8IZC6 1860 aaPredicted RBP16.24■□□□□ 0.19
CLN8-206ENST00000523237 RP1P56715 2156 aa16.24■□□□□ 0.19
CLN8-206ENST00000523237 URB1O60287 2271 aaKnown RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 A0A087WV48 116 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 MYCLP1P12525 358 aaPredicted RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 CTPS1P17812 591 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 ETV3P41162 512 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 SLC1A1P43005 524 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 EPHB1P54762 984 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 DSC2Q02487 901 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 SLC10A2Q12908 348 aaPredicted RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 PERM1Q5SV97 790 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 LRRC38Q5VT99 294 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 KCTD16Q68DU8 428 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 C19orf48Q6RUI8 117 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 NYAP1Q6ZVC0 841 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 HSD11B1LQ7Z5J1 315 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 CCDC13Q8IYE1 715 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 PELI3Q8N2H9 469 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLN8-206ENST00000523237 WDR48Q8TAF3 677 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 LGR4Q9BXB1 951 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 MAK16Q9BXY0 300 aaKnown RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 PHPT1Q9NRX4 125 aaPredicted RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 SIRPGQ9P1W8 387 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 RALYQ9UKM9 306 aaKnown RBP16.23■□□□□ 0.19
CLN8-206ENST00000523237 GPR34Q9UPC5 381 aa16.23■□□□□ 0.19
CLN8-206ENST00000523237 ZFHX4Q86UP3 3567 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 FAM208BQ5VWN6 2430 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 PRSS38A1L453 326 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 GOLGA6CA6NDK9 693 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 GOLGA6BA6NDN3 693 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 BRINP1O60477 761 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 TCEA3O75764 348 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 HLA-DQB2P05538 268 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 GOLGA6DP0CG33 693 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 ZNF30P17039 623 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 TCEAL1Q15170 157 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 PTPRRQ15256 657 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 CRTC1Q6UUV9 634 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 Q6ZVL8 140 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 TAF8Q7Z7C8 310 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 TSPAN33Q86UF1 283 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 HEATR4Q86WZ0 1026 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 PLD5Q8N7P1 536 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 KYQ8NBH2 561 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 LRRN4Q8WUT4 740 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 GRAMD1AQ96CP6 724 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 DCBLD2Q96PD2 775 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 CCDC3Q9BQI4 270 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 TDRD1Q9BXT4 1180 aaKnown RBP16.22■□□□□ 0.19
CLN8-206ENST00000523237 TEX101Q9BY14 249 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 CYP4F12Q9HCS2 524 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 MRPL40Q9NQ50 206 aaKnown RBP16.22■□□□□ 0.19
CLN8-206ENST00000523237 GOLGA6AQ9NYA3 693 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 MOSPD1Q9UJG1 213 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 DNPEPQ9ULA0 475 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 CHKBQ9Y259 395 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 HEY1Q9Y5J3 304 aa16.22■□□□□ 0.19
CLN8-206ENST00000523237 A0A0J9YYE9 177 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 C3orf70A6NLC5 250 aaPredicted RBP16.21■□□□□ 0.19
CLN8-206ENST00000523237 APOL1O14791 398 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 USP12O75317 370 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 TRBC1P01850 177 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 KRT1P04264 644 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 ZFXP17010 805 aaPredicted RBP16.21■□□□□ 0.19
CLN8-206ENST00000523237 TEAD1P28347 426 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 ACTN2P35609 894 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 DPTQ07507 201 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 PPIDQ08752 370 aaKnown RBP16.21■□□□□ 0.19
CLN8-206ENST00000523237 ISXQ2M1V0 245 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 COL28A1Q2UY09 1125 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 LRRC66Q68CR7 880 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 SLC9A4Q6AI14 798 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 RAET1GQ6H3X3 334 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 RBM44Q6ZP01 1051 aaKnown RBP16.21■□□□□ 0.19
CLN8-206ENST00000523237 TECPR1Q7Z6L1 1165 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 RHOT1Q8IXI2 618 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 OR6C4Q8NGE1 309 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 ARRDC2Q8TBH0 407 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 LGMNQ99538 433 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 TMEM168Q9H0V1 697 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 PCDH9Q9HC56 1237 aa16.21■□□□□ 0.19
CLN8-206ENST00000523237 DDX56Q9NY93 547 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms