RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 CNGA3Q16281 694 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 SKIDA1Q1XH10 827 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 GSPT2Q8IYD1 628 aaKnown RBP25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 CBARPQ8N350 705 aaPredicted RBP25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 FBXO36Q8NEA4 188 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 CXorf40AQ8TE69 158 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 STYXQ8WUJ0 223 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 TPSD1Q9BZJ3 242 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 CHRAC1Q9NRG0 131 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 PKP3Q9Y446 797 aa25.68■■□□□ 1.7
NKX2-1-204ENST00000522719 LRRC72A6NJI9 287 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 AXIN1O15169 862 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 FAM153BP0C7A2 387 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 PSMA3P25788 255 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 LIG3P49916 1009 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 STC1P52823 247 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 FAM153CQ494X1 144 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 MAP9Q49MG5 647 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 TSTD2Q5T7W7 516 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 KIAA1161Q6NSJ0 714 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 EMBQ6PCB8 327 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 TMEM135Q86UB9 458 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 FAM124AQ86V42 546 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 IGDCC3Q8IVU1 814 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 EID2BQ96D98 161 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 WDR83Q9BRX9 315 aaKnown RBP25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 CD93Q9NPY3 652 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 IL17CQ9P0M4 197 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 ZC3H7BQ9UGR2 993 aaKnown RBP25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 CYP8B1Q9UNU6 501 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 CHMP2BQ9UQN3 213 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 ZNF106Q9H2Y7 1883 aaKnown RBP25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 A0A0C4DFX4 3053 aa25.67■■□□□ 1.7
NKX2-1-204ENST00000522719 STX7O15400 261 aaKnown RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 USP1O94782 785 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 PCDH8O95206 1070 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 POLBP06746 335 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 CD6P30203 668 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 AVPR2P30518 371 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 ZNF140P52738 457 aaPredicted RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 FASTKD3Q14CZ7 662 aaKnown RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 HP1BP3Q5SSJ5 553 aaPredicted RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 AENQ8WTP8 325 aaKnown RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 WRAP53Q9BUR4 548 aaKnown RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 RAD18Q9NS91 495 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 WSB2Q9NYS7 404 aaPredicted RBP25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 PKD2L2Q9NZM6 624 aa25.66■■□□□ 1.7
NKX2-1-204ENST00000522719 DOCK9Q9BZ29 2069 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3DA0A087WVF3 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3IA0A087WXS9 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3EA0A087X179 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3KA0A087X1G2 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 A0A0U1RQS6 177 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 RGSL1A5PLK6 1076 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3FA6NER0 549 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3LB9A6J9 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3HP0C7X1 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TDGF1P13385 188 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 ACSL1P33121 698 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 HADHAP40939 763 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 PXNP49023 591 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 RPS21P63220 83 aaKnown RBP25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 BRD3Q15059 726 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 MAP7D1Q3KQU3 841 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 ZDHHC20Q5W0Z9 365 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3GQ6DHY5 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3CQ6IPX1 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 ANKMY2Q8IV38 441 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TBC1D3Q8IZP1 549 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 OR4K2Q8NGD2 314 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 OR2T34Q8NGX1 318 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TTC25Q96NG3 672 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 TREX1Q9NSU2 369 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 NLE1Q9NVX2 485 aaPredicted RBP25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 KCTD5Q9NXV2 234 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 FBXO4Q9UKT5 387 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 KCTD3Q9Y597 815 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 RPS6KL1Q9Y6S9 549 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 KMT2EQ8IZD2 1858 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 MUC3AQ02505 3323 aa25.65■■□□□ 1.7
NKX2-1-204ENST00000522719 ERLIN1O75477 346 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 SLC4A1P02730 911 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 C1SP09871 688 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 PTPN5P54829 565 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 CREB5Q02930 508 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 ACVR1Q04771 509 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 ANKRD20A4Q4UJ75 823 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 USP39Q53GS9 565 aaKnown RBP25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 PALM2Q8IXS6 379 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 TOE1Q96GM8 510 aaKnown RBP25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 TXLNGYQ9BZA5 131 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 CDH19Q9H159 772 aa25.64■■□□□ 1.7
NKX2-1-204ENST00000522719 IGHV1OR15-9A0A0B4J2B8 117 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 CCDC151A5D8V7 595 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 MMP20O60882 483 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 SEMA4FO95754 770 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 GSTA2P09210 222 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 C6P13671 934 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 TSHRP16473 764 aa25.63■■□□□ 1.69
NKX2-1-204ENST00000522719 PAMP19021 973 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms