RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 VCLP18206 1134 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 TACR2P21452 398 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 GLRA2P23416 452 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CCND2P30279 289 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CDAP32320 146 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 IDUAP35475 653 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MEOX1P50221 254 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 METAP1P53582 386 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ARSFP54793 590 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ADAM8P78325 824 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ECT2LQ008S8 904 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MAP2K1Q02750 393 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 GABPB1Q06547 395 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 IL24Q13007 206 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 KLF10Q13118 480 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 IKZF1Q13422 519 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SLC39A14Q15043 492 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 DLG2Q15700 870 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 LY6KQ17RY6 165 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 BMT2Q1RMZ1 405 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 PLEKHN1Q494U1 663 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 XKR9Q5GH70 373 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ACSM6Q6P461 480 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 PSRC1Q6PGN9 363 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 SLC36A4Q6YBV0 504 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MTSS1LQ765P7 747 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 RNF144BQ7Z419 303 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ABI3BPQ7Z7G0 1075 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ZNF605Q86T29 641 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 GPAT4Q86UL3 456 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 STK32CQ86UX6 486 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 AMZ2Q86W34 360 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SERPINA12Q8IW75 414 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CCDC13Q8IYE1 715 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SCYL3Q8IZE3 742 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CMTM4Q8IZR5 234 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ENDOVQ8N8Q3 282 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 DRAXINQ8NBI3 349 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 AGBL3Q8NEM8 1001 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 OR10S1Q8NGN2 331 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 WASF1Q92558 559 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SGCDQ92629 289 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 EDC3Q96F86 508 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 EEF2KMTQ96G04 330 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 RPL10LQ96L21 214 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 CNOT6LQ96LI5 555 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 RBM14Q96PK6 669 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 ABHD6Q9BV23 337 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 EDEM2Q9BV94 578 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 KATNB1Q9BVA0 655 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 NACAP1Q9BZK3 213 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 WDR26Q9H7D7 661 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ANKZF1Q9H8Y5 726 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 PALMDQ9NP74 551 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 PAK6Q9NQU5 681 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 HOMER3Q9NSC5 361 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 FAM212BQ9NTI7 297 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 VPS18Q9P253 973 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 DDX25Q9UHL0 483 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 GPR160Q9UJ42 338 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 TRMT6Q9UJA5 497 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 ZNF148Q9UQR1 794 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ITM2BQ9Y287 266 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 TMEM94Q12767 1356 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ZNF804BA4D1E1 1349 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 WDR19Q8NEZ3 1342 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 XKRY2A2RUG3 117 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SH3D21A4FU49 640 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 LRRIQ4A6NIV6 560 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ZAR1LA6NP61 321 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MAGEB17A8MXT2 336 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 FOXO6A8MYZ6 492 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 PPEF2O14830 753 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 FFAR3O14843 346 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 GPR42O15529 346 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 GPRIN2O60269 458 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CCNT1O60563 726 aaKnown RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 NME6O75414 186 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 VNN1O95497 513 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 RLN1P04808 185 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 HEXAP06865 529 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SPATA31D3P0C874 917 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ITGALP20701 1170 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MMP8P22894 467 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 DNASE1P24855 282 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 SLC16A2P36021 539 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 MAPKAPK2P49137 400 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 CDH13P55290 713 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ERVFRD-1P60508 538 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ATP2C1P98194 919 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 B4GALNT1Q00973 533 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 RBPJQ06330 500 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 NAB2Q15742 525 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 TBR1Q16650 682 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 ZXDCQ2QGD7 858 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 HERC4Q5GLZ8 1057 aaPredicted RBP4.06□□□□□ -1.76
SKP1-209ENST00000522552 TMEM198Q66K66 360 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 TMEM211Q6ICI0 200 aa4.06□□□□□ -1.76
SKP1-209ENST00000522552 GLB1LQ6UWU2 654 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms