RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 SLC23A3Q6PIS1 610 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ARHGAP36Q6ZRI8 547 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PARS2Q7L3T8 475 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 RABEPKQ7Z6M1 372 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 TP53INP2Q8IXH6 220 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 OR2I1PQ8NGU4 316 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 OR14C36Q8NHC7 312 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 CEP76Q8TAP6 659 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 C1orf54Q8WWF1 131 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ISG20Q96AZ6 181 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 BIRC7Q96CA5 298 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 RSRC1Q96IZ7 334 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 RBM15Q96T37 977 aaKnown RBP eCLIP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ORAI3Q9BRQ5 295 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 NUSAP1Q9BXS6 441 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ZDHHC6Q9H6R6 413 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 KCNK9Q9NPC2 374 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 BATF3Q9NR55 127 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ETNK2Q9NVF9 386 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 DONSONQ9NYP3 566 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PSMC3IPQ9P2W1 217 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 LHX3Q9UBR4 397 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 UBA2Q9UBT2 640 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 IL36AQ9UHA7 158 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 EIF2B4Q9UI10 523 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 TPX2Q9ULW0 747 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SLC6A14Q9UN76 642 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 NEU2Q9Y3R4 380 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 USH1CQ9Y6N9 552 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PLXNA2O75051 1894 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 CNOT1A5YKK6 2376 aaKnown RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TCRBV7S2A1N4TA0A589 114 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 C4orf47A7E2U8 309 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TCP11X1B4DZS4 312 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 J3KR12 359 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 CDX4O14627 284 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TM9SF1O15321 606 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 BCAT2O15382 392 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 LIASO43766 372 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 MFSD11O43934 449 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 LEFTY1O75610 366 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ZNF189O75820 626 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ATP6V1G2O95670 118 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 IGSF6O95976 241 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 KRT1P04264 644 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 UGT2B4P06133 528 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 CD48P09326 243 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 CCNB1P14635 433 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 NQO1P15559 274 aaKnown RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 GNSP15586 552 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 AMPD1P23109 780 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ITGB7P26010 798 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 CD27P26842 260 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 HCAR3P49019 387 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 PAPOLAP51003 745 aaKnown RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 CCR5P51681 352 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ARSEP51690 589 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 NEK3P51956 506 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ARL4CP56559 192 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TAS2R38P59533 333 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 RHOAP61586 193 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 BNC1Q01954 994 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 BNIP1Q12981 228 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 SNX1Q13596 522 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 DPYSL3Q14195 570 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 KYNUQ16719 465 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 PARP6Q2NL67 630 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 P3H1Q32P28 736 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 GALNTL6Q49A17 601 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 BOLA3Q53S33 107 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ARSIQ5FYB1 569 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ZFYVE27Q5T4F4 411 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 C4orf22Q6V702 233 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 PLPP6Q8IY26 295 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 AGGF1Q8N302 714 aaeCLIP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 RYBPQ8N488 228 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TMIEQ8NEW7 156 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 OR2AP1Q8NGE2 309 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 C1orf216Q8TAB5 229 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 INPP5DQ92835 1189 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 VOPP1Q96AW1 172 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 KLHL29Q96CT2 875 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 PPP1R16AQ96I34 528 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 EXOC2Q96KP1 924 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 SLC6A18Q96N87 628 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 HEPHQ9BQS7 1158 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 RTKNQ9BST9 563 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 GTPBP2Q9BX10 602 aaKnown RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 SLC39A8Q9C0K1 460 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 SP110Q9HB58 689 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 PREBQ9HCU5 417 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TM9SF3Q9HD45 589 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 TMEM9BQ9NQ34 198 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 DYRK4Q9NR20 520 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 EURLQ9NYK6 297 aa6.86□□□□□ -1.31
SPIDR-218ENST00000522222 NOP53Q9NZM5 478 aaKnown RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 RCOR3Q9P2K3 495 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 HECAQ9UBI9 543 aaPredicted RBP6.86□□□□□ -1.31
SPIDR-218ENST00000522222 ZNF148Q9UQR1 794 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms