RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ENO3P13929 434 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 PPP3CCP48454 512 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 RRP1P56182 461 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 SELENOVP59797 346 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 UBXN2AP68543 259 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 GOLGA8DPQ0D2H9 430 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 DLG2Q15700 870 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 CRY2Q49AN0 593 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC9C1Q4G0N8 1177 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 ALG10Q5BKT4 473 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 ALG10BQ5I7T1 473 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 EPHA10Q5JZY3 1008 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 HECTD3Q5T447 861 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 DAB2IPQ5VWQ8 1189 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 LCN10Q6JVE6 187 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 IL27RAQ6UWB1 636 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 PQLC2Q6ZP29 291 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 LURAP1LQ8IV03 231 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 FOXRED2Q8IWF2 684 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 MMP21Q8N119 569 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZCCHC9Q8N567 271 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 PARP16Q8N5Y8 322 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 HORMAD2Q8N7B1 307 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 POGLUT1Q8NBL1 392 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 BEST2Q8NFU1 509 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 GABPB2Q8TAK5 448 aaPredicted RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 CEP76Q8TAP6 659 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 BICD2Q8TD16 824 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 INPP5DQ92835 1189 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF622Q969S3 477 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 JAKMIP2Q96AA8 810 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 TMEM18Q96B42 140 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 COQ8BQ96D53 544 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 CCDC34Q96HJ3 373 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 PAFAH2Q99487 392 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 QTRT1Q9BXR0 403 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 MMP25Q9NPA2 562 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 TMEM184CQ9NVA4 438 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 NOL7Q9UMY1 257 aaKnown RBP3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC8A2Q9UPR5 921 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 CLIC4Q9Y696 253 aa3.52□□□□□ -1.85
HMGN1P28-201ENST00000521340 GPR75-ASB3A0A0A6YYF3 556 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 TMEM202A6NGA9 273 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 URADA6NGE7 173 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 E5RJQ4 531 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 F8W810 466 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 PI4K2BG5E9Z4 385 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 STMND1H3BQB6 276 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 I6L893 689 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 J3KR12 359 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 PPP6CO00743 305 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 WNT9BO14905 357 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 LDB2O43679 373 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RBMXL2O75526 392 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RGS11O94810 467 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SOX30O94993 753 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 HSPA4LO95757 839 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 CYC1P08574 325 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 CHRNB1P11230 501 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 PCNAP12004 261 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 MMP9P14780 707 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 PRLRP16471 622 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 COPB2P35606 906 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RFX5P48382 616 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF41P51814 821 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RPS13P62277 151 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SSBP2P81877 361 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 NAE1Q13564 534 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SCARB2Q14108 478 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF268Q14587 947 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 TMEM266Q2M3C6 531 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 C1orf141Q5JVX7 400 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RBPMS2Q6ZRY4 209 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 DPPA4Q7L190 304 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 GSTA5Q7RTV2 222 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 VSIG1Q86XK7 387 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 MCEMP1Q8IX19 187 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 FAM217AQ8IXS0 508 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 CCDC13Q8IYE1 715 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 HACE1Q8IYU2 909 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 FAM185AQ8N0U4 392 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 BOLLQ8N9W6 283 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SLC44A5Q8NCS7 719 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SAT2Q96F10 170 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RRNAD1Q96FB5 475 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZNF419Q96HQ0 510 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 LINC00615Q96LM1 132 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 DGAT2Q96PD7 388 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SIN3AQ96ST3 1273 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 GAD1Q99259 594 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 TMEM47Q9BQJ4 181 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 APOL6Q9BWW8 343 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 MRPL1Q9BYD6 325 aaKnown RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 EDEM3Q9BZQ6 932 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 LHPPQ9H008 270 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 SIL1Q9H173 461 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ERVMER34-1Q9H9K5 563 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 FLRT1Q9NZU1 646 aa3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 ZHX1Q9UKY1 873 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P28-201ENST00000521340 RAP2CQ9Y3L5 183 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms