RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 TSPAN6O43657 245 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 IGHV4-34P06331 123 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 MLNP12872 115 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 LHCGRP22888 699 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 MAOBP27338 520 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CREB5Q02930 508 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 ELP6Q0PNE2 266 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CDH17Q12864 832 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 RALGDSQ12967 914 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CUL1Q13616 776 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 SPDYCQ5MJ68 293 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CERCAMQ5T4B2 595 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 SEL1L3Q68CR1 1132 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 PPP1R21Q6ZMI0 780 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 LINC00523Q86TU6 105 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 IFT20Q8IY31 132 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 MPP5Q8N3R9 675 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 SUMF1Q8NBK3 374 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 MYRIPQ8NFW9 859 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CXorf40AQ8TE69 158 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 IFT81Q8WYA0 676 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 KLK6Q92876 244 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 BIRC7Q96CA5 298 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 WRAP53Q9BUR4 548 aaKnown RBP15.35■□□□□ 0.05
LSM1-203ENST00000520755 ADGRE3Q9BY15 652 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 XAB2Q9HCS7 855 aaKnown RBP15.35■□□□□ 0.05
LSM1-203ENST00000520755 NFU1Q9UMS0 254 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.35■□□□□ 0.05
LSM1-203ENST00000520755 ATXN2Q99700 1313 aaKnown RBP15.35■□□□□ 0.05
LSM1-203ENST00000520755 E7ESA3 106 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 NDC80O14777 642 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 LMNAP02545 664 aaKnown RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 TPH1P17752 444 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 ITPKAP23677 461 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 NFKBIAP25963 317 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 MGAT1P26572 445 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 MMP12P39900 470 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 TNNT3P45378 269 aaPredicted RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 CCR5P51681 352 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 SESN2P58004 480 aaPredicted RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 RPS21P63220 83 aaKnown RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 CRADDP78560 199 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 CAV1Q03135 178 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 CBLBQ13191 982 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 HLTFQ14527 1009 aaKnown RBP eCLIP15.34■□□□□ 0.05
LSM1-203ENST00000520755 FASTKD3Q14CZ7 662 aaKnown RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 HIF1AQ16665 826 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 CDKN3Q16667 212 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 WDR45BQ5MNZ6 344 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 LAIR1Q6GTX8 287 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 KIAA1161Q6NSJ0 714 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 NEK5Q6P3R8 708 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 USP45Q70EL2 814 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 CYP2U1Q7Z449 544 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 TSPAN33Q86UF1 283 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 TRIM69Q86WT6 500 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 HORMAD1Q86X24 394 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 NDUFAF2Q8N183 169 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 PIGKQ92643 395 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 LYSMD1Q96S90 227 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 FAM129AQ9BZQ8 928 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 MIR1-1HGQ9H1L0 117 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 SYBUQ9NX95 663 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 B4GALT6Q9UBX8 382 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 EIF2B4Q9UI10 523 aaKnown RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 ZFR2Q9UPR6 939 aaKnown RBP15.34■□□□□ 0.05
LSM1-203ENST00000520755 DMDP11532 3685 aa15.34■□□□□ 0.05
LSM1-203ENST00000520755 IGLON5A6NGN9 336 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 AURKAO14965 403 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 MMP20O60882 483 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 PPFIA2O75334 1257 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 EPN2O95208 641 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 CYP2A6P11509 494 aaPredicted RBP15.33■□□□□ 0.04
LSM1-203ENST00000520755 HNF1BP35680 557 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 DHX9Q08211 1270 aaKnown RBP15.33■□□□□ 0.04
LSM1-203ENST00000520755 POU6F1Q14863 301 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 ZNF284Q2VY69 593 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 TMEM52BQ4KMG9 183 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 WDR93Q6P2C0 686 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 DPPA4Q7L190 304 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 TTC30BQ8N4P2 665 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 GPR161Q8N6U8 529 aaKnown RBP15.33■□□□□ 0.04
LSM1-203ENST00000520755 DNAAF3Q8N9W5 541 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 EID2BQ96D98 161 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 SCRN2Q96FV2 425 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 LOXL4Q96JB6 756 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 SIGLEC10Q96LC7 697 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 TRIM56Q9BRZ2 755 aaKnown RBP15.33■□□□□ 0.04
LSM1-203ENST00000520755 PARD6BQ9BYG5 372 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 ARRDC1-AS1Q9H2J1 176 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 GMEB2Q9UKD1 530 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 RAB21Q9UL25 225 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 ZNF711Q9Y462 761 aa15.33■□□□□ 0.04
LSM1-203ENST00000520755 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 PROB1E7EW31 1015 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 SLC31A1O15431 190 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 FAM153BP0C7A2 387 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 ELFN1P0C7U0 828 aa15.32■□□□□ 0.04
LSM1-203ENST00000520755 CD27P26842 260 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms