RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SCAMP1O15126 338 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 ZIC3O60481 467 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 IPO7O95373 1038 aaKnown RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 CENPBP07199 599 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 NGFRP08138 427 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 ACADMP11310 421 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 STX2P32856 288 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 SORDQ00796 357 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 TRAF3Q13114 568 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 FHL1Q13642 323 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 FRG1Q14331 258 aaKnown RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 PLCB4Q15147 1175 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 HLFQ16534 295 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 C2orf68Q2NKX9 166 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 COL28A1Q2UY09 1125 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 MMEL1Q495T6 779 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 CXorf66Q5JRM2 361 aaPredicted RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 FAM69BQ5VUD6 431 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 CCDC30Q5VVM6 783 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 GGNBP1Q5YKI7 109 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 SARM1Q6SZW1 724 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 CYP20A1Q6UW02 462 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 QSOX2Q6ZRP7 698 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 FJX1Q86VR8 437 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 ZC3HC1Q86WB0 502 aaKnown RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 FRMD1Q8N878 549 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 ANKRD52Q8NB46 1076 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 MAGEC3Q8TD91 643 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 THOC3Q96J01 351 aaKnown RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 ZPBPQ9BS86 351 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 LTB4R2Q9NPC1 389 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 HINT3Q9NQE9 182 aaKnown RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 KRT84Q9NSB2 600 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 HCFC1R1Q9NWW0 138 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 RCOR1Q9UKL0 485 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 CDC14AQ9UNH5 594 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 ADAM18Q9Y3Q7 739 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 LAS1LQ9Y4W2 734 aaKnown RBP3.74□□□□□ -1.81
VPS13B-207ENST00000518569 LYVE1Q9Y5Y7 322 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 FAM237BA0A1B0GVD1 139 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 AKR1B15C9JRZ8 316 aaPredicted RBP3.73□□□□□ -1.81
VPS13B-207ENST00000518569 PROB1E7EW31 1015 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 SNAP23O00161 211 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 ZBED4O75132 1171 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 SLC25A12O75746 678 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 IGHV4-30-4P0DP06 118 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 FCGR1AP12314 374 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 KRT10P13645 584 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 NFKBIAP25963 317 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 PBX3P40426 434 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 PRAMEP78395 509 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 ZBED6P86452 979 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 ZXDBP98169 803 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 BNC1Q01954 994 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 RALBP1Q15311 655 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 EFNB3Q15768 340 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 ADIPOQQ15848 244 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 AMZ1Q400G9 498 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 PQLC2Q6ZP29 291 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 TAOK1Q7L7X3 1001 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 SPATA6LQ8N4H0 392 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 GPATCH11Q8N954 259 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 WFIKKN2Q8TEU8 576 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 POMGNT1Q8WZA1 660 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 ARHGEF26Q96DR7 871 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 HARBI1Q96MB7 349 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 HAUS8Q9BT25 410 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 C1QTNF5Q9BXJ0 243 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 ITPAQ9BY32 194 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 HIPK2Q9H2X6 1198 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 C17orf75Q9HAS0 396 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 GPR108Q9NPR9 543 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 CD93Q9NPY3 652 aa3.73□□□□□ -1.81
VPS13B-207ENST00000518569 IGLV5-37A0A075B6J1 123 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 LINC01553A4QN01 128 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 GOLGA6L9A6NEM1 432 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 LACTBL1A8MY62 500 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 HCRTR2O43614 444 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 NDUFS3O75489 264 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 DAB1O75553 588 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 FTCDO95954 541 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 CYC1P08574 325 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 ACAA1P09110 424 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 T-ENOLP0DO92 83 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 SRCP12931 536 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 ZNF12P17014 697 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 MCCP23508 829 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 RRM1P23921 792 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 HOXC9P31274 260 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 CCKARP32238 428 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 CASP2P42575 452 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 PEX5P50542 639 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 F2RL1P55085 397 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 NAP1L1P55209 391 aaKnown RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 ARF3P61204 181 aaPredicted RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 ARF1P84077 181 aaKnown RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 SLC45A4Q5BKX6 768 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 XKR9Q5GH70 373 aa3.72□□□□□ -1.81
VPS13B-207ENST00000518569 GPATCH4Q5T3I0 446 aaKnown RBP3.72□□□□□ -1.81
VPS13B-207ENST00000518569 TTI2Q6NXR4 508 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms