RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 DGCR6Q14129 220 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 RAB39AQ14964 217 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 DDR2Q16832 855 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 EML3Q32P44 896 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PABPC1LQ4VXU2 614 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 AARS2Q5JTZ9 985 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 LDLRAP1Q5SW96 308 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 HECTD2Q5U5R9 776 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CLEC6AQ6EIG7 209 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TRAF7Q6Q0C0 670 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 RIOX2Q8IUF8 465 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 FLCNQ8NFG4 579 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 OR6J1Q8NGC5 347 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MAPK15Q8TD08 544 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 C17orf50Q8WW18 174 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 C18orf25Q96B23 403 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ZHX1-C8orf76Q96EF9 292 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TEKT5Q96M29 485 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 RBM4BQ9BQ04 359 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 RBM4Q9BWF3 364 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 OXCT2Q9BYC2 517 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 DPY30Q9C005 99 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 HAPLN2Q9GZV7 340 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF556Q9HAH1 456 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MOV10Q9HCE1 1003 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ABCB10Q9NRK6 738 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CCM2LQ9NUG4 571 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 EBF1Q9UH73 591 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SIX4Q9UIU6 781 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 NOD1Q9Y239 953 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 BTRCQ9Y297 605 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 DGKBQ9Y6T7 804 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 COL2A1P02458 1487 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 C2orf81A6NN90 581 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PDZK1P1A8MUH7 402 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TMEM233B4DJY2 109 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 G3V2L1 256 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 J3QRK9 145 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ARPC2O15144 300 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MYO1DO94832 1006 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PGK2P07205 417 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 C8BP07358 591 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ALOX12P18054 663 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MYF6P23409 242 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 IL12AP29459 219 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GRIA2P42262 883 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GNA12Q03113 381 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 MAPRE1Q15691 268 aaKnown RBP6.67□□□□□ -1.34
CPNE3-203ENST00000517490 PAGE2BQ5JRK9 111 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SPANXN2Q5MJ10 180 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 NAPRTQ6XQN6 538 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 ATG16L2Q8NAA4 619 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 METTL6Q8TCB7 284 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SLC35F5Q8WV83 523 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 TMIGD2Q96BF3 282 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 FBXL8Q96CD0 374 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GIMAP4Q9NUV9 329 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 GMIPQ9P107 970 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 CRYL1Q9Y2S2 319 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SLC30A1Q9Y6M5 507 aa6.67□□□□□ -1.34
CPNE3-203ENST00000517490 SNPHO15079 494 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 USP17L7P0C7H9 530 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SLC2A4P14672 509 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NDST2P52849 883 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 EEFSECP57772 596 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ECT2LQ008S8 904 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF460Q14592 562 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 PAFAH1B3Q15102 231 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SLC10A6Q3KNW5 377 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ARMCX4Q5H9R4 360 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 KIAA0930Q6ICG6 404 aaPredicted RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TXNDC11Q6PKC3 985 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SH2D5Q6ZV89 423 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 OTOP3Q7RTS5 596 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 AMIGO3Q86WK7 504 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 DENND6AQ8IWF6 608 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CHERPQ8IWX8 916 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SNX19Q92543 992 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SMARCD1Q96GM5 515 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 GLT1D1Q96MS3 346 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 NODALQ96S42 347 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 GPR20Q99678 358 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 SPON2Q9BUD6 331 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CHID1Q9BWS9 393 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CNGB3Q9NQW8 809 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 PKP3Q9Y446 797 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CCDC162PA2VCL2 907 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 RECQL4O94761 1208 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ATG7O95352 703 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 ZNF682O95780 498 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 PCNAP12004 261 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 CYP2B6P20813 491 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 IMPDH1P20839 514 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 AXLP30530 894 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 MTHFRP42898 656 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 LSM3P62310 102 aaKnown RBP6.66□□□□□ -1.34
CPNE3-203ENST00000517490 GHRHRQ02643 423 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 DAG1Q14118 895 aa6.66□□□□□ -1.34
CPNE3-203ENST00000517490 TIGD2Q4W5G0 525 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms