RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 RBPJLQ9UBG7 517 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 RPS6KB2Q9UBS0 482 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 PACSIN3Q9UKS6 424 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 A0A0B4J269 797 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 WTIPA6NIX2 430 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 FTH1P02794 183 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 MIPP30301 263 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 PSMD4P55036 377 aaKnown RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 GNA13Q14344 377 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 SHROOM1Q2M3G4 852 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 SLC9A4Q6AI14 798 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZCCHC8Q6NZY4 707 aaKnown RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 TAF8Q7Z7C8 310 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 PEX5LQ8IYB4 626 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 MIR1-1HGQ9H1L0 117 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 FBXO9Q9UK97 447 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 ERVW-1Q9UQF0 538 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 MTF2Q9Y483 593 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 PCDHB9Q9Y5E1 797 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 BTNL10A8MVZ5 291 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 IL1BP01584 269 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 SEPHS1P49903 392 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 NDUFAF6Q330K2 333 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 KHDC1Q4VXA5 237 aaKnown RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 TNFAIP8L3Q5GJ75 292 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 DENND1CQ8IV53 801 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 MBOAT7Q96N66 472 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 MIEF1Q9NQG6 463 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 CHST7Q9NS84 486 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 NDOR1Q9UHB4 597 aa12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 PNMA8BQ9ULN7 279 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 TNPO3Q9Y5L0 923 aaKnown RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 MAFBQ9Y5Q3 323 aaPredicted RBP12.27□□□□□ -0.44
PCDHGA6-201ENST00000517434 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 A0A0G2JPF8 293 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 HNRNPCL3B7ZW38 293 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZMPSTE24O75844 475 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 HNRNPCL4P0DMR1 293 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 PGAM1P18669 254 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 AMPD1P23109 780 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 GMFBP60983 142 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 CDC16Q13042 620 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 IL18R1Q13478 541 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 GPM6BQ13491 265 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 LIN54Q6MZP7 749 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 TNS4Q8IZW8 715 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 ST6GALNAC4Q9H4F1 302 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 BCLAF3A2AJT9 711 aaKnown RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 LRRC72A6NJI9 287 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 UBXN8O00124 270 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 CDK9P50750 372 aaKnown RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 PHC1P78364 1004 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 UBAP2LQ14157 1087 aaKnown RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 SQLEQ14534 574 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 TARBP2Q15633 366 aaKnown RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 INAVAQ3KP66 663 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 EEF1DP3Q658K8 133 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 DNAAF5Q86Y56 855 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 ERI1Q8IV48 349 aaKnown RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 ARNTL2Q8WYA1 636 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 POP5Q969H6 163 aaKnown RBP12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 BTN2A3PQ96KV6 586 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 MNTQ99583 582 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 PDCD10Q9BUL8 212 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 ABCG4Q9H172 646 aa12.27□□□□□ -0.45
PCDHGA6-201ENST00000517434 GNG14A0A1W2PPG7 69 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 HDAC3O15379 428 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 TLX1P31314 330 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 SPESP1Q6UW49 350 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 FRMD7Q6ZUT3 714 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 KRT77Q7Z794 578 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 IZUMO1Q8IYV9 350 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 RBM15BQ8NDT2 890 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ACBD6Q9BR61 282 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 TTYH1Q9H313 450 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PHPT1Q9NRX4 125 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ADPRHL2Q9NX46 363 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 FAM92AA1XBS5 289 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PRR5-ARHGAP8B1AHC4 643 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 EPN2O95208 641 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PRNPP04156 253 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PRKCIP41743 596 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 MATKP42679 507 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 IDH2P48735 452 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCNG1P51959 295 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 MRPS5P82675 430 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ARHGAP8P85298 464 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 CARTPTQ16568 116 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 TIGD5Q53EQ6 642 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 DBF4BQ8NFT6 615 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ACMSDQ8TDX5 336 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 RTKNQ9BST9 563 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 DHX33Q9H6R0 707 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZFP14Q9HCL3 533 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 KLHL1Q9NR64 748 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 MORF4L1Q9UBU8 362 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PLOD3O60568 738 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms