RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 THY1P04216 161 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 MSH3P20585 1137 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 MST1P26927 711 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 HNRNPH1P31943 449 aaKnown RBP-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 KCNJ10P78508 379 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 SPDYCQ5MJ68 293 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 CELF3Q5SZQ8 465 aaKnown RBP-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 TRNP1Q6NT89 227 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 TLDC1Q6P9B6 456 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 Q6ZRP5 223 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 DPP9Q86TI2 863 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF354CQ86Y25 554 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 DENND1CQ8IV53 801 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 ADSSL1Q8N142 457 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 C17orf53Q8N3J3 647 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 POC5Q8NA72 575 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 TMEM178AQ8NBL3 297 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 IL31RAQ8NI17 732 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 MRAPQ8TCY5 172 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 MVB12AQ96EY5 273 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 NSMCE3Q96MG7 304 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 GAL3ST4Q96RP7 486 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 KXD1Q9BQD3 176 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 CLEC7AQ9BXN2 247 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 KRT84Q9NSB2 600 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 PANK4Q9NVE7 773 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 ERAP1Q9NZ08 941 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 HERC5Q9UII4 1024 aaKnown RBP-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 KLK12Q9UKR0 248 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 SLC12A4Q9UP95 1085 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 OSGIN2Q9Y236 505 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF510Q9Y2H8 683 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 MRFAP1Q9Y605 127 aa-0.21□□□□□ -2.44
RNU6-557P-201ENST00000516842 A0A087WZ62 844 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 FAM168BA1KXE4 195 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 SH2D7A6NKC9 451 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 NKX2-8O15522 239 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 HNRNPRO43390 633 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 SYNCRIPO60506 623 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 IGSF3O75054 1194 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 RGS11O94810 467 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 SLCO2B1O94956 709 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 IGHV4-38-2P0DP08 117 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 ANXA7P20073 488 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 PIK3R1P27986 724 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 FAM3BP58499 235 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 RPL15P61313 204 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 CALCOCO2Q13137 446 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 PUM3Q15397 648 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 AAK1Q2M2I8 961 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 DCAF6Q58WW2 860 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 RRAGBQ5VZM2 374 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 TMEM88Q6PEY1 159 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 KIAA1324Q6UXG2 1013 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 BAIAP2L2Q6UXY1 529 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF589Q86UQ0 364 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 DGKHQ86XP1 1220 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 TMTC1Q8IUR5 882 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 DENND6AQ8IWF6 608 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 VPS52Q8N1B4 723 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 Q8N9L7 120 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF540Q8NDQ6 660 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 OR2AK2Q8NG84 335 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 KCNG4Q8TDN1 519 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 C2CD4CQ8TF44 421 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 GIMAP5Q96F15 307 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 CFAP57Q96MR6 1250 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 TBX15Q96SF7 602 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 YME1L1Q96TA2 773 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 MPHOSPH8Q99549 860 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 NPAS1Q99742 590 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 CMKLR1Q99788 373 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 GDF15Q99988 308 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 IFT27Q9BW83 186 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 HES7Q9BYE0 225 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 XRN2Q9H0D6 950 aaKnown RBP eCLIP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 CXorf56Q9H5V9 222 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 PCDH9Q9HC56 1237 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 KCNK9Q9NPC2 374 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 MKKSQ9NPJ1 570 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 FSCN3Q9NQT6 498 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 RNF186Q9NXI6 227 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 MCM9Q9NXL9 1143 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF319Q9P2F9 582 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 ABCD2Q9UBJ2 740 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 ZNF69Q9UC07 566 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 KLHL20Q9Y2M5 609 aa-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 UBE2J1Q9Y385 318 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 COPG1Q9Y678 874 aaKnown RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 MORC2Q9Y6X9 1032 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-557P-201ENST00000516842 NACAE9PAV3 2078 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 CYP3A7-CYP3A51PA0A087WV96 503 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 A0A096LPK6 155 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 C11orf97A0A1B0GVM6 126 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 SLCO1B7G3V0H7 640 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 ZNF197O14709 1029 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 WNT9BO14905 357 aa-0.23□□□□□ -2.45
RNU6-557P-201ENST00000516842 SLC25A17O43808 307 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms