RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 CCDC26Q8TAB7 109 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 FIBINQ8TAL6 211 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CASKIN2Q8WXE0 1202 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 PPM1EQ8WY54 764 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ING5Q8WYH8 240 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 KRT35Q92764 455 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 FATE1Q969F0 183 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 HDAC11Q96DB2 347 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CHFRQ96EP1 664 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TMA16Q96EY4 203 aaKnown RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ALG14Q96F25 216 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TSPAN17Q96FV3 270 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 PKNOX2Q96KN3 472 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RPGRIP1Q96KN7 1286 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 LMLNQ96KR4 655 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RPRD1AQ96P16 312 aaPredicted RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 LRRC3BQ96PB8 259 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CSPG4P5Q96PW8 444 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RNF157Q96PX1 679 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 XPO6Q96QU8 1125 aaKnown RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TUBGCP5Q96RT8 1024 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 PEBP4Q96S96 227 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CYP2S1Q96SQ9 504 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ELF4Q99607 663 aaPredicted RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SLC38A3Q99624 504 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 APOL5Q9BWW9 433 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TLR10Q9BXR5 811 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 FRMD8P1Q9BZ68 369 aaPredicted RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 BRINP2Q9C0B6 783 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ZYG11BQ9C0D3 744 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 BRD8Q9H0E9 1235 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 MAGEH1Q9H213 219 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 LRRC19Q9H756 370 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 BRD9Q9H8M2 597 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ECT2Q9H8V3 914 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 PCDH18Q9HCL0 1135 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 EMC7Q9NPA0 242 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 HPS4Q9NQG7 708 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 GKN1Q9NS71 199 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 UCKL1Q9NWZ5 548 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 DUS2Q9NX74 493 aaKnown RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SMPD4Q9NXE4 827 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RNF14Q9UBS8 474 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 WNT16Q9UBV4 365 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TRIM10Q9UDY6 481 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 OR12D3Q9UGF7 316 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 AMACRQ9UHK6 382 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 XPO7Q9UIA9 1087 aaKnown RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 AMFRQ9UKV5 643 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TTC7AQ9ULT0 858 aaPredicted RBP2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 PYCARDQ9ULZ3 195 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SORCS3Q9UPU3 1222 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CCL26Q9Y258 94 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TBC1D30Q9Y2I9 924 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 JRKLQ9Y4A0 524 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RAD54BQ9Y620 910 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 HS3ST4Q9Y661 456 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 WNT6Q9Y6F9 365 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 DUSP10Q9Y6W6 482 aa2.24□□□□□ -2.05
SCARNA16.3-201ENST00000516595 MYH10P35580 1976 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SYNJ2BP-COX16A0A087WUM0 186 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 A0A0U1RQJ8 604 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 LRRD1A4D1F6 860 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CFAP69A5D8W1 941 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 OTOL1A6NHN0 477 aaPredicted RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ARHGAP42A6NI28 874 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SHISA7A6NL88 538 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 USP27XA6NNY8 438 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 HACD1B0YJ81 288 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 NEDD8-MDP1E9PL57 170 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SPECC1L-ADORA2AF8WAN1 911 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 FAM72CH0Y354 149 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 APOC4-APOC2K7ER74 178 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ACOT7O00154 380 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 EEF2KO00418 725 aaKnown RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ALOX15BO15296 676 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 MTSS1O43312 755 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 DCXO43602 365 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TIMM44O43615 452 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CREB3O43889 395 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 MFSD11O43934 449 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ZNF500O60304 480 aaPredicted RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RAMP2O60895 175 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TULP3O75386 442 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 KATNA1O75449 491 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 TJP3O95049 919 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 PAPSS2O95340 614 aaPredicted RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 FTCDO95954 541 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 APOC2P02655 101 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 KRT1P04264 644 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 APODP05090 189 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 ASGR2P07307 311 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 RHOCP08134 193 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 SRPRAP08240 638 aaKnown RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 HMBSP08397 361 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 DLDP09622 509 aaKnown RBP2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 CISD3P0C7P0 127 aa2.23□□□□□ -2.05
SCARNA16.3-201ENST00000516595 IRF1P10914 325 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms