RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 KCTD6Q8NC69 237 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 FATE1Q969F0 183 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 CCDC74AQ96AQ1 378 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 DTD2Q96FN9 168 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 SCRN2Q96FV2 425 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 CRELD1Q96HD1 420 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 DNAJC7Q99615 494 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 DEF6Q9H4E7 631 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 ASCL3Q9NQ33 180 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 PHPT1Q9NRX4 125 aaPredicted RBP17.5■□□□□ 0.39
DDX41-217ENST00000515562 AMACRQ9UHK6 382 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 PCDHGA8Q9Y5G5 932 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 RP1P56715 2156 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 LOC400499M0QZD8 3231 aa17.5■□□□□ 0.39
DDX41-217ENST00000515562 SSU72P8A0A1W2PR75 194 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 PRSS38A1L453 326 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 NPIPB15A6NHN6 443 aaPredicted RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 NTN3O00634 580 aaPredicted RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 TPM1P09493 284 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 CES1P23141 567 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 TEAD1P28347 426 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 RBMS1P29558 406 aaKnown RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 MAN1A1P33908 653 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 MLLT3P42568 568 aaPredicted RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 TLE3Q04726 772 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 IFI16Q16666 785 aaKnown RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 DENND2CQ68D51 928 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 ALG1LQ6GMV1 187 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 NYAP1Q6ZVC0 841 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 TAF8Q7Z7C8 310 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 SPACA3Q8IXA5 215 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 OR8K1Q8NGG5 319 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 MAML1Q92585 1016 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 FAF2Q96CS3 445 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 SEMA3CQ99985 751 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 LGR4Q9BXB1 951 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 CYP4F12Q9HCS2 524 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 MRPL40Q9NQ50 206 aaKnown RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 ZNHIT6Q9NWK9 470 aaKnown RBP17.49■□□□□ 0.39
DDX41-217ENST00000515562 RAI2Q9Y5P3 530 aa17.49■□□□□ 0.39
DDX41-217ENST00000515562 D6RAR5 112 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 MATN3O15232 486 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 TMEM253P0C7T8 217 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 MX2P20592 715 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 CA4P22748 312 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 ETV3P41162 512 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 PDX1P52945 283 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 ITKQ08881 620 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 SOWAHCQ53LP3 525 aaPredicted RBP17.48■□□□□ 0.39
DDX41-217ENST00000515562 HSD11B1LQ7Z5J1 315 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 PELI3Q8N2H9 469 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 CBARPQ8N350 705 aaPredicted RBP17.48■□□□□ 0.39
DDX41-217ENST00000515562 FAM46DQ8NEK8 389 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 GPR156Q8NFN8 814 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 WDR36Q8NI36 951 aaKnown RBP17.48■□□□□ 0.39
DDX41-217ENST00000515562 KIAA1524Q8TCG1 905 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 FCRL3Q96P31 734 aaPredicted RBP17.48■□□□□ 0.39
DDX41-217ENST00000515562 TSGA13Q96PP4 275 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 GFM1Q96RP9 751 aaKnown RBP17.48■□□□□ 0.39
DDX41-217ENST00000515562 UBL7Q96S82 380 aaPredicted RBP17.48■□□□□ 0.39
DDX41-217ENST00000515562 TEX101Q9BY14 249 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 TMEM168Q9H0V1 697 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 PRORYQ9H606 182 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 MOSPD1Q9UJG1 213 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 DNPEPQ9ULA0 475 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 PPIL1Q9Y3C6 166 aa17.48■□□□□ 0.39
DDX41-217ENST00000515562 IGSF10Q6WRI0 2623 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 CCDC187A0A096LP49 1063 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 TMX2-CTNND1H3BSU7 103 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 AKR1B10O60218 316 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 FZD6O60353 706 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 RPLP0P05388 317 aaKnown RBP17.47■□□□□ 0.39
DDX41-217ENST00000515562 PNLIPP16233 465 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 GLB1P16278 677 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 ZNF30P17039 623 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 CCNCP24863 283 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 UCNP55089 124 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 CDK3Q00526 305 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 DPTQ07507 201 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 ASTE1Q2TB18 679 aaPredicted RBP17.47■□□□□ 0.39
DDX41-217ENST00000515562 ATP13A4Q4VNC1 1196 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 CERCAMQ5T4B2 595 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 BROXQ5VW32 411 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 RAET1GQ6H3X3 334 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 ARL14Q8N4G2 192 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 PIH1D2Q8WWB5 315 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 KCNE4Q8WWG9 221 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 LIN37Q96GY3 246 aaPredicted RBP17.47■□□□□ 0.39
DDX41-217ENST00000515562 ZNF830Q96NB3 372 aaPredicted RBP17.47■□□□□ 0.39
DDX41-217ENST00000515562 SLC46A1Q96NT5 459 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 PACSIN1Q9BY11 444 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 DPEP2Q9H4A9 486 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 CARS2Q9HA77 564 aaKnown RBP17.47■□□□□ 0.39
DDX41-217ENST00000515562 RABGEF1Q9UJ41 708 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 APPL1Q9UKG1 709 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 TTLL3Q9Y4R7 772 aa17.47■□□□□ 0.39
DDX41-217ENST00000515562 A0A1W2PNU3 283 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms