RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PLRG1O43660 514 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 KDM4BO94953 1096 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 PMS2P2O95744 297 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 CYC1P08574 325 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 SNRNP70P08621 437 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 RRM1P23921 792 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 TBX2Q13207 712 aaPredicted RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 FGFBP1Q14512 234 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 CTF1Q16619 201 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 COL28A1Q2UY09 1125 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 GGNBP1Q5YKI7 109 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 CCDC70Q6NSX1 233 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 CDC73Q6P1J9 531 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 HAPLN4Q86UW8 402 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 WDR63Q8IWG1 891 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 SPATA6LQ8N4H0 392 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 METTL6Q8TCB7 284 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 RND1Q92730 232 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 TANKQ92844 425 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 SLC41A2Q96JW4 573 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 SH3GL2Q99962 352 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 FAM110AQ9BQ89 295 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 HAUS8Q9BT25 410 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 POLR3GLQ9BT43 218 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 IFIH1Q9BYX4 1025 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 USP44Q9H0E7 712 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 ESRP2Q9H6T0 727 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 GAREM1Q9H706 876 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 HINT3Q9NQE9 182 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 PLSCR4Q9NRQ2 329 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 INTS6Q9UL03 887 aaKnown RBP4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 CEPT1Q9Y6K0 416 aa4.83□□□□□ -1.64
SMARCA5-203ENST00000515531 SEC14L2O76054 403 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 AFPP02771 609 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 SPARCP09486 303 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 KRT10P13645 584 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 RPL7AP62424 266 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 TNFAIP1Q13829 316 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 OASLQ15646 514 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 CCNG2Q16589 344 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 EIF2S3LQ2VIR3 472 aaKnown RBP4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 C6orf141Q5SZD1 244 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 TSSK4Q6SA08 328 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 PCYOX1LQ8NBM8 494 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 WFIKKN2Q8TEU8 576 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 RFFLQ8WZ73 363 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 TMEM47Q9BQJ4 181 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 KIF9Q9HAQ2 790 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 ZNF224Q9NZL3 707 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 SIX4Q9UIU6 781 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 MKLN1Q9UL63 735 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 VDAC3Q9Y277 283 aa4.82□□□□□ -1.64
SMARCA5-203ENST00000515531 HNRNPCL2B2RXH8 293 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 PRR23D1E9PI22 279 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 RFPL2O75678 378 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 RTN3O95197 1032 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 PRR23D2P0DMB1 279 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 MAOAP21397 527 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 ERVFC1-1P60608 527 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 ZNF155Q12901 538 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 OLIG2Q13516 323 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 KRT24Q2M2I5 525 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 SETMARQ53H47 684 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 PLEKHA7Q6IQ23 1121 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 KCTD18Q6PI47 426 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 UNQ6126/PRO20091Q6UXV3 157 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 CCNI2Q6ZMN8 369 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 QSOX2Q6ZRP7 698 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 EXOC3L1Q86VI1 746 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 DIS3L2Q8IYB7 885 aaKnown RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 RBMXL3Q8N7X1 1067 aaKnown RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 ETNPPLQ8TBG4 499 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 PSPC1Q8WXF1 523 aaKnown RBP4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 HARBI1Q96MB7 349 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 IL17FQ96PD4 163 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 UNC45AQ9H3U1 944 aa4.81□□□□□ -1.64
SMARCA5-203ENST00000515531 A0A0G2JPF8 293 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 HNRNPCL3B7ZW38 293 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 HNRNPCL1O60812 293 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 LDB3O75112 727 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 HNRNPCL4P0DMR1 293 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 HSPA1AP0DMV8 641 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 HSPA1BP0DMV9 641 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 ZNF182P17025 639 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 DDIT3P35638 169 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 PIP4K2AP48426 406 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 CCR9P51686 369 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 CLCNKAP51800 687 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 GOLGA8DPQ0D2H9 430 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 DCTN2Q13561 401 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 FRG1Q14331 258 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 USP41Q3LFD5 358 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 DPCR1Q3MIW9 517 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 SIGIRRQ6IA17 410 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 RGMBQ6NW40 437 aa4.8□□□□□ -1.64
SMARCA5-203ENST00000515531 NR2C2APQ86WQ0 139 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms