RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 FUCA1P04066 466 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 CEACAM5P06731 702 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 ELFN1P0C7U0 828 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 PNMA6AP0CW24 399 aaPredicted RBP10.95□□□□□ -0.66
DDX41-216ENST00000513562 AK4P27144 223 aaPredicted RBP10.95□□□□□ -0.66
DDX41-216ENST00000513562 ATP11AP98196 1134 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 MAP7Q14244 749 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 C2CD6Q53TS8 623 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 AFMIDQ63HM1 303 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 ZNF787Q6DD87 383 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 ISM2Q6H9L7 571 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 PNCKQ6P2M8 343 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 LIPIQ6XZB0 460 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 KDELC2Q7Z4H8 507 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 TICAM1Q8IUC6 712 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 HSCBQ8IWL3 235 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 RTL3Q8N8U3 475 aaKnown RBP10.95□□□□□ -0.66
DDX41-216ENST00000513562 TUBGCP5Q96RT8 1024 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 FRMD8Q9BZ67 464 aaPredicted RBP10.95□□□□□ -0.66
DDX41-216ENST00000513562 FBXO8Q9NRD0 319 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 MAN1B1Q9UKM7 699 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 CTNND2Q9UQB3 1225 aa10.95□□□□□ -0.66
DDX41-216ENST00000513562 MRPS18BQ9Y676 258 aaKnown RBP10.95□□□□□ -0.66
DDX41-216ENST00000513562 ABCA12Q86UK0 2595 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 CELSR2Q9HCU4 2923 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 RASA4BC9J798 803 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 FOXN3O00409 490 aaPredicted RBP10.94□□□□□ -0.66
DDX41-216ENST00000513562 TEX33O43247 280 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 RASA4O43374 803 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 RFPL1O75677 317 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 DDAH2O95865 285 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 PDGFAP04085 211 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 PLEKP08567 350 aaPredicted RBP10.94□□□□□ -0.66
DDX41-216ENST00000513562 F8A1P23610 371 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 PON1P27169 355 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 GNPDA1P46926 289 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 YBEYP58557 167 aaPredicted RBP10.94□□□□□ -0.66
DDX41-216ENST00000513562 PEX6Q13608 980 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 EXOC3L4Q17RC7 722 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 SLC30A9Q6PML9 568 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 GBP6Q6ZN66 633 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 DPPA4Q7L190 304 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 ARHGAP22Q7Z5H3 698 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 CAMK1DQ8IU85 385 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 EMC1Q8N766 993 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 CPT1CQ8TCG5 803 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 PTCD2Q8WV60 388 aaKnown RBP10.94□□□□□ -0.66
DDX41-216ENST00000513562 ECHDC3Q96DC8 303 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 TEX101Q9BY14 249 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 MAGEB5Q9BZ81 275 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 ZMYND15Q9H091 742 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 SUDS3Q9H7L9 328 aaPredicted RBP10.94□□□□□ -0.66
DDX41-216ENST00000513562 APMAPQ9HDC9 416 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 SIX2Q9NPC8 291 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 UBA2Q9UBT2 640 aaPredicted RBP10.94□□□□□ -0.66
DDX41-216ENST00000513562 SUFUQ9UMX1 484 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 RPS6KL1Q9Y6S9 549 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 FBN2P35556 2912 aa10.94□□□□□ -0.66
DDX41-216ENST00000513562 ICE1Q9Y2F5 2266 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 FAM170AA1A519 330 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 FURINP09958 794 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 SERPINA4P29622 427 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 DCTP40126 519 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 FASLGP48023 281 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 PMS2P54278 862 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 BPIFB4P59827 614 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 CTBSQ01459 385 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 CDO1Q16878 200 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 C15orf59Q2T9L4 293 aaPredicted RBP10.93□□□□□ -0.66
DDX41-216ENST00000513562 PARP15Q460N3 678 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 CCDC14Q49A88 953 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 WDR74Q6RFH5 385 aaPredicted RBP10.93□□□□□ -0.66
DDX41-216ENST00000513562 MAMDC2Q7Z304 686 aaPredicted RBP10.93□□□□□ -0.66
DDX41-216ENST00000513562 FAM71AQ8IYT1 594 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 ESX1Q8N693 406 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 CCDC185Q8N715 623 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 NTAN1Q96AB6 310 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 COQ10AQ96MF6 247 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 PDCL3Q9H2J4 239 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 ATP13A3Q9H7F0 1226 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 PDFQ9HBH1 243 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 GDPD2Q9HCC8 539 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 METTL5Q9NRN9 209 aaKnown RBP10.93□□□□□ -0.66
DDX41-216ENST00000513562 PHPT1Q9NRX4 125 aaPredicted RBP10.93□□□□□ -0.66
DDX41-216ENST00000513562 HOOK1Q9UJC3 728 aaKnown RBP10.93□□□□□ -0.66
DDX41-216ENST00000513562 DNAJC12Q9UKB3 198 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 TLK1Q9UKI8 766 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 POLHQ9Y253 713 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 PCDHB3Q9Y5E6 796 aa10.93□□□□□ -0.66
DDX41-216ENST00000513562 GTPBP10A4D1E9 387 aaKnown RBP10.92□□□□□ -0.66
DDX41-216ENST00000513562 POLR1CO15160 346 aaPredicted RBP10.92□□□□□ -0.66
DDX41-216ENST00000513562 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
DDX41-216ENST00000513562 CYP11B1P15538 503 aa10.92□□□□□ -0.66
DDX41-216ENST00000513562 COL8A1P27658 744 aa10.92□□□□□ -0.66
DDX41-216ENST00000513562 ERCC5P28715 1186 aaPredicted RBP10.92□□□□□ -0.66
DDX41-216ENST00000513562 TNFRSF8P28908 595 aa10.92□□□□□ -0.66
DDX41-216ENST00000513562 SDC4P31431 198 aa10.92□□□□□ -0.66
DDX41-216ENST00000513562 ADCY8P40145 1251 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms