RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 KLHL32Q96NJ5 620 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 BBC3Q96PG8 261 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 KLF6Q99612 283 aaPredicted RBP7.27□□□□□ -1.25
USP46-208ENST00000512656 C11orf70Q9BRQ4 267 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 SELENOOQ9BVL4 669 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 SLC13A1Q9BZW2 595 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 TTYH3Q9C0H2 523 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 VPS16Q9H269 839 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 GANQ9H2C0 597 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 POLR1BQ9H9Y6 1135 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 THSD1Q9NS62 852 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 TAB2Q9NYJ8 693 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 ADAM22Q9P0K1 906 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 DNAI1Q9UI46 699 aa7.27□□□□□ -1.25
USP46-208ENST00000512656 MYO18BQ8IUG5 2567 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 ATMQ13315 3056 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 FAM170AA1A519 330 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CPED1A4D0V7 1026 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 TMEM110-MUSTN1A8MSY1 372 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 LMO7DNF2Z398 122 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RNF103O00237 685 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 AREL1O15033 823 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RAD51BO15315 384 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 KDELR3O43731 214 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CPNE3O75131 537 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 TCEA3O75764 348 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 TM7SF2O76062 418 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CD160O95971 181 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 ANXA6P08133 673 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CCDC172P0C7W6 258 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 GPD1P21695 349 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 EPHB2P29323 1055 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RBMS1P29558 406 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 HTR7P34969 479 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RFC1P35251 1148 aaPredicted RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 AIF1P55008 147 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 GSCP56915 257 aaPredicted RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 PFN3P60673 137 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RHOAP61586 193 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 GABREP78334 506 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 FMO1Q01740 532 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 TLE3Q04726 772 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 ELP6Q0PNE2 266 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 MAP7Q14244 749 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 FGL2Q14314 439 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 POU4F3Q15319 338 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 KRT31Q15323 416 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 NR0B2Q15466 257 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CDKN3Q16667 212 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 MSMPQ1L6U9 139 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 PARP15Q460N3 678 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CDPF1Q6NVV7 123 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 ESRP1Q6NXG1 681 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 SCYL2Q6P3W7 929 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RBM44Q6ZP01 1051 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 EFL1Q7Z2Z2 1120 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 VPS36Q86VN1 386 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 PHF13Q86YI8 300 aaPredicted RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 SPACA3Q8IXA5 215 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 FSTL5Q8N475 847 aaPredicted RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 RTL3Q8N8U3 475 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 NEK11Q8NG66 645 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 OR6K2Q8NGY2 324 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 ATL2Q8NHH9 583 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 JOSD2Q8TAC2 188 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 GPT2Q8TD30 523 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 HCAR2Q8TDS4 363 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 LMX1AQ8TE12 382 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 NAT6Q93015 286 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 NCAPGQ9BPX3 1015 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 DPH1Q9BZG8 443 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 CATSPERBQ9H7T0 1116 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 NLRC4Q9NPP4 1024 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 FAM207AQ9NSI2 230 aaPredicted RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 DKK3Q9UBP4 350 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 APOBEC3BQ9UH17 382 aaKnown RBP7.26□□□□□ -1.25
USP46-208ENST00000512656 MFHAS1Q9Y4C4 1052 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 PCDHB1Q9Y5F3 818 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 RAI2Q9Y5P3 530 aa7.26□□□□□ -1.25
USP46-208ENST00000512656 TENM4Q6N022 2769 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 DOCK9Q9BZ29 2069 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 LY6G6EA0A0G2JKS1 128 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 EME2A4GXA9 379 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 SIGLEC16A6NMB1 481 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 WASH4PA8MWX3 477 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 FAM72CH0Y354 149 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 TMX2-CTNND1H3BSU7 103 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 MUSKO15146 869 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 FGF10O15520 208 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 TMCC1O94876 653 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 MPOP05164 745 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 ALPIP09923 528 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 UNGP13051 313 aaPredicted RBP7.25□□□□□ -1.25
USP46-208ENST00000512656 DRD2P14416 443 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 CHRNB2P17787 502 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 HTR1BP28222 390 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 GKP32189 559 aa7.25□□□□□ -1.25
USP46-208ENST00000512656 PEX5P50542 639 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms