RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SLC11A2P49281 568 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 ERVPABLB-1P60509 514 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 RACK1P63244 317 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 SLC14A2Q15849 920 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 PARP15Q460N3 678 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 TMCO4Q5TGY1 634 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF783Q6ZMS7 281 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 CYS1Q717R9 158 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 CCDC13Q8IYE1 715 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 PDIK1LQ8N165 341 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 OR2T3Q8NH03 318 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 EXTL1Q92935 676 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 SKA1Q96BD8 255 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 ZIM3Q96PE6 472 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 RBM15Q96T37 977 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 IL12RB2Q99665 862 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 POLR1BQ9H9Y6 1135 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 EBF2Q9HAK2 575 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 ASCL3Q9NQ33 180 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 THSD1Q9NS62 852 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 STARD5Q9NSY2 213 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 FBXO10Q9UK96 956 aa10.58□□□□□ -0.72
PDLIM5-217ENST00000512274 CHD5Q8TDI0 1954 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 A0A1W2PPC4 97 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 RNF103O00237 685 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 NPC1O15118 1278 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 MATN3O15232 486 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 CSO75390 466 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 STC2O76061 302 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TMEM63AO94886 807 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 SYF2O95926 243 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ETS1P14921 441 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ITGB6P18564 788 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TACR2P21452 398 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ACP1P24666 158 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 PTPN3P26045 913 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 CD38P28907 300 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 LSSP48449 732 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ARRB1P49407 418 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 DAB2P98082 770 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 E2F1Q01094 437 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TRIP13Q15645 432 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 HIF1AQ16665 826 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TEX44Q53QW1 395 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 FAM133BQ5BKY9 247 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TNFAIP8L3Q5GJ75 292 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 C3orf38Q5JPI3 329 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ANKRD20A2Q5SQ80 823 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ADGRF1Q5T601 910 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ANKRD20A1Q5TYW2 823 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 AGBL2Q5U5Z8 902 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ANKRD20A3Q5VUR7 823 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 DENND2CQ68D51 928 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 KIAA0895LQ68EN5 471 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ITPRIPL1Q6GPH6 555 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 FBXL22Q6P050 247 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF449Q6P9G9 518 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 FOXR1Q6PIV2 292 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 Q6ZNB5 142 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ARHGEF18Q6ZSZ5 1173 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TDRPQ86YL5 185 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 CCNJLQ8IV13 435 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 RIBC1Q8N443 379 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 GANCQ8TET4 914 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 PGM2Q96G03 612 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 TEKT5Q96M29 485 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF599Q96NL3 588 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 RUFY1Q96T51 708 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 CDC42EP4Q9H3Q1 356 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ELOVL2Q9NXB9 296 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 SATB2Q9UPW6 733 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 PLAAQ9Y263 795 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 ATP8A1Q9Y2Q0 1164 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 MFHAS1Q9Y4C4 1052 aa10.57□□□□□ -0.72
PDLIM5-217ENST00000512274 BLACEA4D250 179 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 HMGB1P1B2RPK0 211 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 F5H5T6 163 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 YKT6O15498 198 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 PSMD3O43242 534 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SIGLEC6O43699 453 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 MAFKO60675 156 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 CLDN11O75508 207 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 DNTTP04053 509 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 FAM87AP0C7U9 286 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 CHKAP35790 457 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 ETFBP38117 255 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 GGCXP38435 758 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 MAGEA4P43358 317 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 VPS41P49754 854 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 CDH4P55283 916 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 RPS14P62263 151 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 ZNF844Q08AG5 666 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 SERINC3Q13530 473 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 FRG1Q14331 258 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 STAT4Q14765 748 aa10.56□□□□□ -0.72
PDLIM5-217ENST00000512274 PROX2Q3B8N5 592 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms